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Protein

30S ribosomal protein S4e

Gene

rps4e

Organism
Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciPISL384616:G1G7P-618-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S4eUniRule annotation
Gene namesi
Name:rps4eUniRule annotation
Ordered Locus Names:Pisl_0560
OrganismiPyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3)
Taxonomic identifieri384616 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiThermoprotealesThermoproteaceaePyrobaculum
Proteomesi
  • UP000002595 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000813481 – 23830S ribosomal protein S4eAdd BLAST238

Interactioni

Protein-protein interaction databases

STRINGi384616.Pisl_0560

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini38 – 110S4 RNA-bindingUniRule annotationAdd BLAST73

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS4 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04093 Archaea
COG1471 LUCA
HOGENOMiHOG000231324
KOiK02987
OMAiRKDYKFP
OrthoDBiPOG093Z0C23

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di2.30.30.30, 1 hit
2.40.50.740, 1 hit
HAMAPiMF_00485 Ribosomal_S4e, 1 hit
InterProiView protein in InterPro
IPR014722 Rib_L2_dom2
IPR000876 Ribosomal_S4e
IPR013845 Ribosomal_S4e_central_region
IPR038237 Ribosomal_S4e_central_sf
IPR013843 Ribosomal_S4e_N
IPR002942 S4_RNA-bd
PANTHERiPTHR11581 PTHR11581, 1 hit
PfamiView protein in Pfam
PF00900 Ribosomal_S4e, 1 hit
PF08071 RS4NT, 1 hit
PF01479 S4, 1 hit
PIRSFiPIRSF002116 Ribosomal_S4, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002667 Ribosomal_S4e_central, 1 hit
SMARTiView protein in SMART
SM00363 S4, 1 hit
PROSITEiView protein in PROSITE
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

A1RS06-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVHLRRTTAP YWWPIPRKIG GVWVVRSSPG PHSLAYSLPL AIIIRDVLKY
60 70 80 90 100
AKTMREARYI ISRGYVKIDG VIRKDYKFPV GLMDVVEIVP TGEIYRVVPD
110 120 130 140 150
EKKYYALIPI SSEEATLKLL RVEGKTAVKG GKLQLHFHDG RNLIVSQDVG
160 170 180 190 200
RHIKTFDTVL YDLQNKNIKM HIPFKLGAYA VVTRGGNVGF SGKLYEIVWT
210 220 230
LKRRQSVVAL KRNEEVRRTI LDYIMITGSE APVIKISP
Length:238
Mass (Da):27,128
Last modified:February 6, 2007 - v1
Checksum:iB3A2956C9786E3FD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000504 Genomic DNA Translation: ABL87738.1
RefSeqiWP_011762314.1, NC_008701.1

Genome annotation databases

EnsemblBacteriaiABL87738; ABL87738; Pisl_0560
GeneIDi4617479
KEGGipis:Pisl_0560

Similar proteinsi

Entry informationi

Entry nameiRS4E_PYRIL
AccessioniPrimary (citable) accession number: A1RS06
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: February 6, 2007
Last modified: May 23, 2018
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
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