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A1RPI8 (A1RPI8_SHESW) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393

EC=1.15.1.1 RuleBase RU000393
Gene names
Ordered Locus Names:Sputw3181_3778 EMBL ABM26583.1
OrganismShewanella sp. (strain W3-18-1) [Complete proteome] [HAMAP] EMBL ABM26583.1
Taxonomic identifier351745 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length173 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393

Cofactor

Binds 1 copper ion per subunit By similarity. RuleBase RU000393

Binds 1 zinc ion per subunit By similarity. RuleBase RU000393

Sequence similarities

Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2121 Potential EMBL ABM26583.1
Chain22 – 173152 Potential EMBL ABM26583.1
PRO_5000204389

Sequences

Sequence LengthMass (Da)Tools
A1RPI8 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: FEEEEA5F388F6A50

FASTA17317,927
        10         20         30         40         50         60 
MNKLHLASLS ILLLSGTAFS QESQVTMELL NAEGNTPIGT ISLNDSEFGL VLTPNLSSLT 

        70         80         90        100        110        120 
PGVHGFHVHQ TGNCEPVTKD GKTVLGGGAG GHYDPDNTGK HGTPWSTDNH KGDLPPLYVD 

       130        140        150        160        170 
EHGKATTAVL APRLKVNDVK GKSLMVHVGG DNHSDHPAPL GGGGARMACG VIK 

« Hide

References

[1]"Complete sequence of Shewanella sp. W3-18-1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Lykidis A., Tiedje J., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: W3-18-1 EMBL ABM26583.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000503 Genomic DNA. Translation: ABM26583.1.
RefSeqYP_965137.1. NC_008750.1.

3D structure databases

ProteinModelPortalA1RPI8.
SMRA1RPI8. Positions 34-173.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING351745.Sputw3181_3778.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM26583; ABM26583; Sputw3181_3778.
GeneID4661546.
KEGGshw:Sputw3181_3778.
PATRIC23601510. VBISheSp103602_3960.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2032.
HOGENOMHOG000263449.
KOK04565.
OMADHPKPLG.
OrthoDBEOG6K13RS.

Enzyme and pathway databases

BioCycSSP351745:GCOY-3893-MONOMER.

Family and domain databases

Gene3D2.60.40.200. 1 hit.
InterProIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SSF49329. 1 hit.
PROSITEPS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1RPI8_SHESW
AccessionPrimary (citable) accession number: A1RPI8
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: July 9, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)