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A1RP94 (SELD_SHESW) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Selenide, water dikinase
EC=2.7.9.3
Alternative name(s):
Selenium donor protein
Selenophosphate synthase
Gene names
Name:selD
Ordered Locus Names:Sputw3181_3680
OrganismShewanella sp. (strain W3-18-1) [Complete proteome] [HAMAP]
Taxonomic identifier351745 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length352 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes selenophosphate from selenide and ATP By similarity. HAMAP MF_00625

Catalytic activity

ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625

Cofactor

Magnesium By similarity. HAMAP MF_00625

Sequence similarities

Belongs to the selenophosphate synthase 1 family. Class I subfamily.

Ontologies

Keywords
   LigandATP-binding
Magnesium
Nucleotide-binding
Selenium
   Molecular functionKinase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

selenide, water dikinase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 352352Selenide, water dikinase HAMAP MF_00625
PRO_1000051607

Regions

Nucleotide binding236 – 2427ATP Potential

Sites

Active site231 Potential
Site261Important for catalytic activity By similarity

Sequences

Sequence LengthMass (Da)Tools
A1RP94 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 4EF7F55E968E9CEB

FASTA35236,929
        10         20         30         40         50         60 
MSDSPVTLPE SIKLTEYSHG AGCGCKISPK VLSTILASQL PVFTDPNLLV GNQSRDDAAV 

        70         80         90        100        110        120 
YKLNDEIGII STTDFFMPIV DDPFTFGRIA ATNAISDIYA MGGTPIMAIA ILGWPINKLP 

       130        140        150        160        170        180 
AEIAQQVVDG GRQACMEAGI MLAGGHSIDA PEPIFGLAVT GQIALSDLKQ NDTAKKGDRL 

       190        200        210        220        230        240 
YLTKPIGIGI LTTAQKQKKL HDEDSLIAVN AMCQLNTIGA TIAKISGVNA LTDVTGFGLA 

       250        260        270        280        290        300 
GHLLEMCQGA NLTAKLKFDA VPLLPRALDY LALGCVPGGT HRNYDSYGEH LPELSEHQKA 

       310        320        330        340        350 
ILCDPQTSGG LLVAVSAAAE AELIALLDAN HITPICIGSL ETPTTQANVV LC

« Hide

References

[1]"Complete sequence of Shewanella sp. W3-18-1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Lykidis A., Tiedje J., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: W3-18-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000503 Genomic DNA. Translation: ABM26489.1.
RefSeqYP_965043.1. NC_008750.1.

3D structure databases

ProteinModelPortalA1RP94.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1RP94.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4659855.
GenomeReviewsGene locus Sputw3181_3680 in contig CP000503_GR.
KEGGshw:Sputw3181_3680.
PATRIC23601294. VBISheSp103602_3856.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0709.
HOGENOMHBG383791.
OMAMMAIAIL.
ProtClustDBPRK00943.

Family and domain databases

HAMAPMF_00625. SelD.
[Tree]
InterProIPR000728. AIR_synth.
IPR010918. AIR_synth_C.
IPR016188. PurM_N-like.
IPR004536. SelD.
IPR023061. SelD_I.
[Graphical view]
KOK01008.
PfamPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
[Graphical view]
PIRSFPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMSSF56042. AIR_synth_C. 1 hit.
SSF55326. PurM_N-like. 1 hit.
TIGRFAMsTIGR00476. SelD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameSELD_SHESW
AccessionPrimary (citable) accession number: A1RP94
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: February 6, 2007
Last modified: January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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