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A1RMR3

- A1RMR3_SHESW

UniProt

A1RMR3 - A1RMR3_SHESW

Protein

Pseudouridine synthase

Gene

Sputw3181_3143

Organism
Shewanella sp. (strain W3-18-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. pseudouridine synthase activity Source: InterPro
    2. RNA binding Source: InterPro

    GO - Biological processi

    1. pseudouridine synthesis Source: InterPro

    Keywords - Molecular functioni

    IsomeraseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciSSP351745:GCOY-3244-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
    Gene namesi
    Ordered Locus Names:Sputw3181_3143Imported
    OrganismiShewanella sp. (strain W3-18-1)Imported
    Taxonomic identifieri351745 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000002597: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi351745.Sputw3181_3143.

    Structurei

    3D structure databases

    ProteinModelPortaliA1RMR3.
    SMRiA1RMR3. Positions 3-322.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the pseudouridine synthase rluA family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0564.
    HOGENOMiHOG000275919.
    KOiK06180.
    OMAiRDIVHGG.
    OrthoDBiEOG6P070X.

    Family and domain databases

    Gene3Di3.10.290.10. 1 hit.
    InterProiIPR020103. PsdUridine_synth_cat_dom.
    IPR006225. PsdUridine_synth_RluC/D.
    IPR006224. PsdUridine_synth_RluC/D_CS.
    IPR006145. PsdUridine_synth_RsuA/RluD.
    IPR002942. S4_RNA-bd.
    [Graphical view]
    PfamiPF00849. PseudoU_synth_2. 1 hit.
    PF01479. S4. 1 hit.
    [Graphical view]
    SMARTiSM00363. S4. 1 hit.
    [Graphical view]
    SUPFAMiSSF55120. SSF55120. 1 hit.
    TIGRFAMsiTIGR00005. rluA_subfam. 1 hit.
    PROSITEiPS01129. PSI_RLU. 1 hit.
    PS50889. S4. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A1RMR3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTQEINLKSE ISATQTGLRL DQALAELFPD YSRTRIKEWI LSDAVYVDGV    50
    IVNKPREKVF ELQQIEIAAT LEEEVHAAAQ AIELNIVYED DHILVINKQA 100
    GLVVHPGAGN ADGTLMNALL HHCPDIEHVP RAGIVHRLDK DTTGLMVVAK 150
    TVEAQTHLVA ALQAREITRE YEAIVMGTMT GGGTVDEPIG RHPTKRTHMA 200
    VHHSGKPAVT HYRVAEKFRN HTRLRLRLES GRTHQIRVHM EYIGHVLVGD 250
    PVYGGRPKPP KAASPEFFEI LKNFKRQALH AVRLELAHPV SCEIMSWQAP 300
    IPEDMVILTK ALRQDTVEHP IEYL 324
    Length:324
    Mass (Da):36,321
    Last modified:February 6, 2007 - v1
    Checksum:i96C26F5C10155FFB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000503 Genomic DNA. Translation: ABM25958.1.
    RefSeqiYP_964512.1. NC_008750.1.

    Genome annotation databases

    EnsemblBacteriaiABM25958; ABM25958; Sputw3181_3143.
    GeneIDi4658754.
    KEGGishw:Sputw3181_3143.
    PATRICi23600145. VBISheSp103602_3293.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000503 Genomic DNA. Translation: ABM25958.1 .
    RefSeqi YP_964512.1. NC_008750.1.

    3D structure databases

    ProteinModelPortali A1RMR3.
    SMRi A1RMR3. Positions 3-322.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 351745.Sputw3181_3143.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABM25958 ; ABM25958 ; Sputw3181_3143 .
    GeneIDi 4658754.
    KEGGi shw:Sputw3181_3143.
    PATRICi 23600145. VBISheSp103602_3293.

    Phylogenomic databases

    eggNOGi COG0564.
    HOGENOMi HOG000275919.
    KOi K06180.
    OMAi RDIVHGG.
    OrthoDBi EOG6P070X.

    Enzyme and pathway databases

    BioCyci SSP351745:GCOY-3244-MONOMER.

    Family and domain databases

    Gene3Di 3.10.290.10. 1 hit.
    InterProi IPR020103. PsdUridine_synth_cat_dom.
    IPR006225. PsdUridine_synth_RluC/D.
    IPR006224. PsdUridine_synth_RluC/D_CS.
    IPR006145. PsdUridine_synth_RsuA/RluD.
    IPR002942. S4_RNA-bd.
    [Graphical view ]
    Pfami PF00849. PseudoU_synth_2. 1 hit.
    PF01479. S4. 1 hit.
    [Graphical view ]
    SMARTi SM00363. S4. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55120. SSF55120. 1 hit.
    TIGRFAMsi TIGR00005. rluA_subfam. 1 hit.
    PROSITEi PS01129. PSI_RLU. 1 hit.
    PS50889. S4. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: W3-18-1Imported.

    Entry informationi

    Entry nameiA1RMR3_SHESW
    AccessioniPrimary (citable) accession number: A1RMR3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 6, 2007
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3