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A1RMR3

- A1RMR3_SHESW

UniProt

A1RMR3 - A1RMR3_SHESW

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Protein

Pseudouridine synthase

Gene
Sputw3181_3143
Organism
Shewanella sp. (strain W3-18-1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. pseudouridine synthase activity Source: InterPro
  2. RNA binding Source: InterPro

GO - Biological processi

  1. pseudouridine synthesis Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationImported

Enzyme and pathway databases

BioCyciSSP351745:GCOY-3244-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Ordered Locus Names:Sputw3181_3143Imported
OrganismiShewanella sp. (strain W3-18-1)Imported
Taxonomic identifieri351745 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002597: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi351745.Sputw3181_3143.

Structurei

3D structure databases

ProteinModelPortaliA1RMR3.
SMRiA1RMR3. Positions 3-322.

Family & Domainsi

Sequence similaritiesi

Belongs to the pseudouridine synthase rluA family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0564.
HOGENOMiHOG000275919.
KOiK06180.
OMAiRDIVHGG.
OrthoDBiEOG6P070X.

Family and domain databases

Gene3Di3.10.290.10. 1 hit.
InterProiIPR020103. PsdUridine_synth_cat_dom.
IPR006225. PsdUridine_synth_RluC/D.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
IPR002942. S4_RNA-bd.
[Graphical view]
PfamiPF00849. PseudoU_synth_2. 1 hit.
PF01479. S4. 1 hit.
[Graphical view]
SMARTiSM00363. S4. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
TIGRFAMsiTIGR00005. rluA_subfam. 1 hit.
PROSITEiPS01129. PSI_RLU. 1 hit.
PS50889. S4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1RMR3-1 [UniParc]FASTAAdd to Basket

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MTQEINLKSE ISATQTGLRL DQALAELFPD YSRTRIKEWI LSDAVYVDGV    50
IVNKPREKVF ELQQIEIAAT LEEEVHAAAQ AIELNIVYED DHILVINKQA 100
GLVVHPGAGN ADGTLMNALL HHCPDIEHVP RAGIVHRLDK DTTGLMVVAK 150
TVEAQTHLVA ALQAREITRE YEAIVMGTMT GGGTVDEPIG RHPTKRTHMA 200
VHHSGKPAVT HYRVAEKFRN HTRLRLRLES GRTHQIRVHM EYIGHVLVGD 250
PVYGGRPKPP KAASPEFFEI LKNFKRQALH AVRLELAHPV SCEIMSWQAP 300
IPEDMVILTK ALRQDTVEHP IEYL 324
Length:324
Mass (Da):36,321
Last modified:February 6, 2007 - v1
Checksum:i96C26F5C10155FFB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000503 Genomic DNA. Translation: ABM25958.1.
RefSeqiYP_964512.1. NC_008750.1.

Genome annotation databases

EnsemblBacteriaiABM25958; ABM25958; Sputw3181_3143.
GeneIDi4658754.
KEGGishw:Sputw3181_3143.
PATRICi23600145. VBISheSp103602_3293.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000503 Genomic DNA. Translation: ABM25958.1 .
RefSeqi YP_964512.1. NC_008750.1.

3D structure databases

ProteinModelPortali A1RMR3.
SMRi A1RMR3. Positions 3-322.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 351745.Sputw3181_3143.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABM25958 ; ABM25958 ; Sputw3181_3143 .
GeneIDi 4658754.
KEGGi shw:Sputw3181_3143.
PATRICi 23600145. VBISheSp103602_3293.

Phylogenomic databases

eggNOGi COG0564.
HOGENOMi HOG000275919.
KOi K06180.
OMAi RDIVHGG.
OrthoDBi EOG6P070X.

Enzyme and pathway databases

BioCyci SSP351745:GCOY-3244-MONOMER.

Family and domain databases

Gene3Di 3.10.290.10. 1 hit.
InterProi IPR020103. PsdUridine_synth_cat_dom.
IPR006225. PsdUridine_synth_RluC/D.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
IPR002942. S4_RNA-bd.
[Graphical view ]
Pfami PF00849. PseudoU_synth_2. 1 hit.
PF01479. S4. 1 hit.
[Graphical view ]
SMARTi SM00363. S4. 1 hit.
[Graphical view ]
SUPFAMi SSF55120. SSF55120. 1 hit.
TIGRFAMsi TIGR00005. rluA_subfam. 1 hit.
PROSITEi PS01129. PSI_RLU. 1 hit.
PS50889. S4. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: W3-18-1Imported.

Entry informationi

Entry nameiA1RMR3_SHESW
AccessioniPrimary (citable) accession number: A1RMR3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 14, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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