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A1RK79

- A1RK79_SHESW

UniProt

A1RK79 - A1RK79_SHESW

Protein
Submitted name:

MLTD_N domain protein

Gene

Sputw3181_2250

Organism
Shewanella sp. (strain W3-18-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 43 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. lytic transglycosylase activity Source: InterPro

    GO - Biological processi

    1. peptidoglycan metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciSSP351745:GCOY-2328-MONOMER.

    Protein family/group databases

    CAZyiCBM50. Carbohydrate-Binding Module Family 50.
    GH23. Glycoside Hydrolase Family 23.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    MLTD_N domain proteinImported
    Gene namesi
    Ordered Locus Names:Sputw3181_2250Imported
    OrganismiShewanella sp. (strain W3-18-1)Imported
    Taxonomic identifieri351745 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000002597: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi351745.Sputw3181_2250.

    Structurei

    3D structure databases

    ProteinModelPortaliA1RK79.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0741.
    HOGENOMiHOG000258639.
    KOiK08307.
    OMAiYNPAYNQ.
    OrthoDBiEOG6038ZC.

    Family and domain databases

    Gene3Di3.10.350.10. 3 hits.
    InterProiIPR018392. LysM_dom.
    IPR023346. Lysozyme-like_dom.
    IPR008258. TGlycosylase-like_SLT.
    IPR000189. Transglyc_AS.
    [Graphical view]
    PfamiPF01476. LysM. 3 hits.
    PF01464. SLT. 1 hit.
    [Graphical view]
    SMARTiSM00257. LysM. 3 hits.
    [Graphical view]
    SUPFAMiSSF53955. SSF53955. 1 hit.
    SSF54106. SSF54106. 3 hits.
    PROSITEiPS00922. TRANSGLYCOSYLASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A1RK79-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRVSLYIVVG GFALLAGCQT LDNPEVTKPE AKAVTKPNTV TPFYLSSEVE    50
    SAQITDVWER IRQGMQLPIP DQKLVNQYRD WYIKNPKHLE IISERAAPYM 100
    YMIVEELEKR HLPIEIALLP IIESAFDPSA SSASAASGLW QFTTPMANHF 150
    GLEMNWWYDG RRDVPASTIA ALDMLEYLYD KTNNNWLYAF AAYNSGESRV 200
    LNAIKNNEAK GLKTDFWSLN LPKETKRYVP QLLALAEVIK HADEYGITLA 250
    PIENTPSIEV VDIDSQIDLA MAAGLANMTT MELQKLNPGY HRWATSPLGP 300
    HTLVLPIDKS EEFKKALAET ESEARMSWLR YTIKSGDSIG AIAKKHHTTV 350
    AAIRAANGMK NNTIVAGKHL IIPVSADDKQ LYAQSTSQKL PKKLRSSTNT 400
    QLTHKVQSGD TLWEIAKKYN VTIKQLTVWN HLKEDSKLQT GQKLAVLAPK 450
    HTETTEKTRT VSYKVKSGDS LARIASKFNV TVTELLEWNS LTQSQYLQPG 500
    QVLKLVVDES KLNA 514
    Length:514
    Mass (Da):57,584
    Last modified:February 6, 2007 - v1
    Checksum:iAC4A9DC8DC7E11A9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000503 Genomic DNA. Translation: ABM25074.1.
    RefSeqiYP_963628.1. NC_008750.1.

    Genome annotation databases

    EnsemblBacteriaiABM25074; ABM25074; Sputw3181_2250.
    GeneIDi4658644.
    KEGGishw:Sputw3181_2250.
    PATRICi23598215. VBISheSp103602_2351.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000503 Genomic DNA. Translation: ABM25074.1 .
    RefSeqi YP_963628.1. NC_008750.1.

    3D structure databases

    ProteinModelPortali A1RK79.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 351745.Sputw3181_2250.

    Protein family/group databases

    CAZyi CBM50. Carbohydrate-Binding Module Family 50.
    GH23. Glycoside Hydrolase Family 23.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABM25074 ; ABM25074 ; Sputw3181_2250 .
    GeneIDi 4658644.
    KEGGi shw:Sputw3181_2250.
    PATRICi 23598215. VBISheSp103602_2351.

    Phylogenomic databases

    eggNOGi COG0741.
    HOGENOMi HOG000258639.
    KOi K08307.
    OMAi YNPAYNQ.
    OrthoDBi EOG6038ZC.

    Enzyme and pathway databases

    BioCyci SSP351745:GCOY-2328-MONOMER.

    Family and domain databases

    Gene3Di 3.10.350.10. 3 hits.
    InterProi IPR018392. LysM_dom.
    IPR023346. Lysozyme-like_dom.
    IPR008258. TGlycosylase-like_SLT.
    IPR000189. Transglyc_AS.
    [Graphical view ]
    Pfami PF01476. LysM. 3 hits.
    PF01464. SLT. 1 hit.
    [Graphical view ]
    SMARTi SM00257. LysM. 3 hits.
    [Graphical view ]
    SUPFAMi SSF53955. SSF53955. 1 hit.
    SSF54106. SSF54106. 3 hits.
    PROSITEi PS00922. TRANSGLYCOSYLASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: W3-18-1Imported.

    Entry informationi

    Entry nameiA1RK79_SHESW
    AccessioniPrimary (citable) accession number: A1RK79
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 6, 2007
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 43 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3