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Protein
Submitted name:

MLTD_N domain protein

Gene

Sputw3181_2250

Organism
Shewanella sp. (strain W3-18-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. lytic transglycosylase activity Source: InterPro

GO - Biological processi

  1. peptidoglycan metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSSP351745:GCOY-2328-MONOMER.

Protein family/group databases

CAZyiCBM50. Carbohydrate-Binding Module Family 50.
GH23. Glycoside Hydrolase Family 23.

Names & Taxonomyi

Protein namesi
Submitted name:
MLTD_N domain proteinImported
Gene namesi
Ordered Locus Names:Sputw3181_2250Imported
OrganismiShewanella sp. (strain W3-18-1)Imported
Taxonomic identifieri351745 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002597: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi351745.Sputw3181_2250.

Structurei

3D structure databases

ProteinModelPortaliA1RK79.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0741.
HOGENOMiHOG000258639.
KOiK08307.
OMAiYNPAYNQ.
OrthoDBiEOG6038ZC.

Family and domain databases

Gene3Di3.10.350.10. 3 hits.
InterProiIPR018392. LysM_dom.
IPR023346. Lysozyme-like_dom.
IPR008258. TGlycosylase-like_SLT.
IPR000189. Transglyc_AS.
[Graphical view]
PfamiPF01476. LysM. 3 hits.
PF01464. SLT. 1 hit.
[Graphical view]
SMARTiSM00257. LysM. 3 hits.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF54106. SSF54106. 3 hits.
PROSITEiPS00922. TRANSGLYCOSYLASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1RK79-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRVSLYIVVG GFALLAGCQT LDNPEVTKPE AKAVTKPNTV TPFYLSSEVE
60 70 80 90 100
SAQITDVWER IRQGMQLPIP DQKLVNQYRD WYIKNPKHLE IISERAAPYM
110 120 130 140 150
YMIVEELEKR HLPIEIALLP IIESAFDPSA SSASAASGLW QFTTPMANHF
160 170 180 190 200
GLEMNWWYDG RRDVPASTIA ALDMLEYLYD KTNNNWLYAF AAYNSGESRV
210 220 230 240 250
LNAIKNNEAK GLKTDFWSLN LPKETKRYVP QLLALAEVIK HADEYGITLA
260 270 280 290 300
PIENTPSIEV VDIDSQIDLA MAAGLANMTT MELQKLNPGY HRWATSPLGP
310 320 330 340 350
HTLVLPIDKS EEFKKALAET ESEARMSWLR YTIKSGDSIG AIAKKHHTTV
360 370 380 390 400
AAIRAANGMK NNTIVAGKHL IIPVSADDKQ LYAQSTSQKL PKKLRSSTNT
410 420 430 440 450
QLTHKVQSGD TLWEIAKKYN VTIKQLTVWN HLKEDSKLQT GQKLAVLAPK
460 470 480 490 500
HTETTEKTRT VSYKVKSGDS LARIASKFNV TVTELLEWNS LTQSQYLQPG
510
QVLKLVVDES KLNA
Length:514
Mass (Da):57,584
Last modified:February 6, 2007 - v1
Checksum:iAC4A9DC8DC7E11A9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000503 Genomic DNA. Translation: ABM25074.1.
RefSeqiYP_963628.1. NC_008750.1.

Genome annotation databases

EnsemblBacteriaiABM25074; ABM25074; Sputw3181_2250.
GeneIDi4658644.
KEGGishw:Sputw3181_2250.
PATRICi23598215. VBISheSp103602_2351.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000503 Genomic DNA. Translation: ABM25074.1.
RefSeqiYP_963628.1. NC_008750.1.

3D structure databases

ProteinModelPortaliA1RK79.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi351745.Sputw3181_2250.

Protein family/group databases

CAZyiCBM50. Carbohydrate-Binding Module Family 50.
GH23. Glycoside Hydrolase Family 23.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABM25074; ABM25074; Sputw3181_2250.
GeneIDi4658644.
KEGGishw:Sputw3181_2250.
PATRICi23598215. VBISheSp103602_2351.

Phylogenomic databases

eggNOGiCOG0741.
HOGENOMiHOG000258639.
KOiK08307.
OMAiYNPAYNQ.
OrthoDBiEOG6038ZC.

Enzyme and pathway databases

BioCyciSSP351745:GCOY-2328-MONOMER.

Family and domain databases

Gene3Di3.10.350.10. 3 hits.
InterProiIPR018392. LysM_dom.
IPR023346. Lysozyme-like_dom.
IPR008258. TGlycosylase-like_SLT.
IPR000189. Transglyc_AS.
[Graphical view]
PfamiPF01476. LysM. 3 hits.
PF01464. SLT. 1 hit.
[Graphical view]
SMARTiSM00257. LysM. 3 hits.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF54106. SSF54106. 3 hits.
PROSITEiPS00922. TRANSGLYCOSYLASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: W3-18-1Imported.

Entry informationi

Entry nameiA1RK79_SHESW
AccessioniPrimary (citable) accession number: A1RK79
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: January 7, 2015
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.