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A1RK79

- A1RK79_SHESW

UniProt

A1RK79 - A1RK79_SHESW

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Protein
Submitted name: MLTD_N domain protein
Gene
Sputw3181_2250
Organism
Shewanella sp. (strain W3-18-1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. lytic transglycosylase activity Source: InterPro

GO - Biological processi

  1. peptidoglycan metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSSP351745:GCOY-2328-MONOMER.

Protein family/group databases

CAZyiCBM50. Carbohydrate-Binding Module Family 50.
GH23. Glycoside Hydrolase Family 23.

Names & Taxonomyi

Protein namesi
Submitted name:
MLTD_N domain proteinImported
Gene namesi
Ordered Locus Names:Sputw3181_2250Imported
OrganismiShewanella sp. (strain W3-18-1)Imported
Taxonomic identifieri351745 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002597: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi351745.Sputw3181_2250.

Structurei

3D structure databases

ProteinModelPortaliA1RK79.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0741.
HOGENOMiHOG000258639.
KOiK08307.
OMAiYNPAYNQ.
OrthoDBiEOG6038ZC.

Family and domain databases

Gene3Di3.10.350.10. 3 hits.
InterProiIPR018392. LysM_dom.
IPR023346. Lysozyme-like_dom.
IPR008258. TGlycosylase-like_SLT.
IPR000189. Transglyc_AS.
[Graphical view]
PfamiPF01476. LysM. 3 hits.
PF01464. SLT. 1 hit.
[Graphical view]
SMARTiSM00257. LysM. 3 hits.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF54106. SSF54106. 3 hits.
PROSITEiPS00922. TRANSGLYCOSYLASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1RK79-1 [UniParc]FASTAAdd to Basket

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MRVSLYIVVG GFALLAGCQT LDNPEVTKPE AKAVTKPNTV TPFYLSSEVE    50
SAQITDVWER IRQGMQLPIP DQKLVNQYRD WYIKNPKHLE IISERAAPYM 100
YMIVEELEKR HLPIEIALLP IIESAFDPSA SSASAASGLW QFTTPMANHF 150
GLEMNWWYDG RRDVPASTIA ALDMLEYLYD KTNNNWLYAF AAYNSGESRV 200
LNAIKNNEAK GLKTDFWSLN LPKETKRYVP QLLALAEVIK HADEYGITLA 250
PIENTPSIEV VDIDSQIDLA MAAGLANMTT MELQKLNPGY HRWATSPLGP 300
HTLVLPIDKS EEFKKALAET ESEARMSWLR YTIKSGDSIG AIAKKHHTTV 350
AAIRAANGMK NNTIVAGKHL IIPVSADDKQ LYAQSTSQKL PKKLRSSTNT 400
QLTHKVQSGD TLWEIAKKYN VTIKQLTVWN HLKEDSKLQT GQKLAVLAPK 450
HTETTEKTRT VSYKVKSGDS LARIASKFNV TVTELLEWNS LTQSQYLQPG 500
QVLKLVVDES KLNA 514
Length:514
Mass (Da):57,584
Last modified:February 6, 2007 - v1
Checksum:iAC4A9DC8DC7E11A9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000503 Genomic DNA. Translation: ABM25074.1.
RefSeqiYP_963628.1. NC_008750.1.

Genome annotation databases

EnsemblBacteriaiABM25074; ABM25074; Sputw3181_2250.
GeneIDi4658644.
KEGGishw:Sputw3181_2250.
PATRICi23598215. VBISheSp103602_2351.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000503 Genomic DNA. Translation: ABM25074.1 .
RefSeqi YP_963628.1. NC_008750.1.

3D structure databases

ProteinModelPortali A1RK79.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 351745.Sputw3181_2250.

Protein family/group databases

CAZyi CBM50. Carbohydrate-Binding Module Family 50.
GH23. Glycoside Hydrolase Family 23.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABM25074 ; ABM25074 ; Sputw3181_2250 .
GeneIDi 4658644.
KEGGi shw:Sputw3181_2250.
PATRICi 23598215. VBISheSp103602_2351.

Phylogenomic databases

eggNOGi COG0741.
HOGENOMi HOG000258639.
KOi K08307.
OMAi YNPAYNQ.
OrthoDBi EOG6038ZC.

Enzyme and pathway databases

BioCyci SSP351745:GCOY-2328-MONOMER.

Family and domain databases

Gene3Di 3.10.350.10. 3 hits.
InterProi IPR018392. LysM_dom.
IPR023346. Lysozyme-like_dom.
IPR008258. TGlycosylase-like_SLT.
IPR000189. Transglyc_AS.
[Graphical view ]
Pfami PF01476. LysM. 3 hits.
PF01464. SLT. 1 hit.
[Graphical view ]
SMARTi SM00257. LysM. 3 hits.
[Graphical view ]
SUPFAMi SSF53955. SSF53955. 1 hit.
SSF54106. SSF54106. 3 hits.
PROSITEi PS00922. TRANSGLYCOSYLASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: W3-18-1Imported.

Entry informationi

Entry nameiA1RK79_SHESW
AccessioniPrimary (citable) accession number: A1RK79
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: September 3, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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