A1RK79 (A1RK79_SHESW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
MLTD_N domain protein EMBL ABM25074.1

Gene names

Ordered Locus Names:

Sputw3181_2250

Organism

Shewanella sp. (strain W3-18-1) [Complete proteome] [HAMAP] EMBL ABM25074.1

Taxonomic identifier

351745 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	514 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan metabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	lytic transglycosylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1RK79 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: AC4A9DC8DC7E11A9	FASTA	514	57,584
	10 20 30 40 50 60 MRVSLYIVVG GFALLAGCQT LDNPEVTKPE AKAVTKPNTV TPFYLSSEVE SAQITDVWER 70 80 90 100 110 120 IRQGMQLPIP DQKLVNQYRD WYIKNPKHLE IISERAAPYM YMIVEELEKR HLPIEIALLP 130 140 150 160 170 180 IIESAFDPSA SSASAASGLW QFTTPMANHF GLEMNWWYDG RRDVPASTIA ALDMLEYLYD 190 200 210 220 230 240 KTNNNWLYAF AAYNSGESRV LNAIKNNEAK GLKTDFWSLN LPKETKRYVP QLLALAEVIK 250 260 270 280 290 300 HADEYGITLA PIENTPSIEV VDIDSQIDLA MAAGLANMTT MELQKLNPGY HRWATSPLGP 310 320 330 340 350 360 HTLVLPIDKS EEFKKALAET ESEARMSWLR YTIKSGDSIG AIAKKHHTTV AAIRAANGMK 370 380 390 400 410 420 NNTIVAGKHL IIPVSADDKQ LYAQSTSQKL PKKLRSSTNT QLTHKVQSGD TLWEIAKKYN 430 440 450 460 470 480 VTIKQLTVWN HLKEDSKLQT GQKLAVLAPK HTETTEKTRT VSYKVKSGDS LARIASKFNV 490 500 510 TVTELLEWNS LTQSQYLQPG QVLKLVVDES KLNA

References

[1]

"Complete sequence of Shewanella sp. W3-18-1." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., Tiedje J., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: W3-18-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000503 Genomic DNA. Translation: ABM25074.1.
RefSeq	YP_963628.1. NC_008750.1.
3D structure databases
ProteinModelPortal	A1RK79.
ModBase	Search...
Protein-protein interaction databases
STRING	351745.Sputw3181_2250.
Protein family/group databases
CAZy	CBM50. Carbohydrate-Binding Module Family 50. GH23. Glycoside Hydrolase Family 23.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABM25074; ABM25074; Sputw3181_2250.
GeneID	4658644.
KEGG	shw:Sputw3181_2250.
PATRIC	23598215. VBISheSp103602_2351.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0741.
HOGENOM	HOG000258639.
KO	K08307.
OMA	YAIAAYN.
ProtClustDB	CLSK906772.
Family and domain databases
InterPro	IPR023346. Lysozyme-like_dom. IPR008258. Lytic_TGlycosylase-like_cat. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. IPR000189. Transglyc_AS. [Graphical view]
Pfam	PF01476. LysM. 3 hits. PF01464. SLT. 1 hit. [Graphical view]
SMART	SM00257. LysM. 3 hits. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
PROSITE	PS00922. TRANSGLYCOSYLASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1RK79_SHESW

Accession

Primary (citable) accession number: A1RK79

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)