A1RJE9 (A1RJE9_SHESW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-N-arabinofuranosidase EMBL ABM24794.1
EC=3.2.1.55 EMBL ABM24794.1

Gene names

Ordered Locus Names:

Sputw3181_1959

Organism

Shewanella sp. (strain W3-18-1) [Complete proteome] [HAMAP] EMBL ABM24794.1

Taxonomic identifier

351745 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	315 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABM24794.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-N-arabinofuranosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1RJE9 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: CDDAC2EF8106FDCC	FASTA	315	35,861
	10 20 30 40 50 60 MLKLTPLIEQ RADPFIYKHT DGFYYFTASV PQYDRIELRR ASTIAGLADA VPVDVWHKPD 70 80 90 100 110 120 TGPYSDLVWA PELHFNQGAW YLYVAIAPSR EIKDALFQHR MYVLRCNDAN PLTGKWQFLG 130 140 150 160 170 180 QLDTGIDTFC LDATTFEHNG QLYYVWAQKA PDIQGNSNLY IAKMDTPDKI SSAPVMLTKP 190 200 210 220 230 240 EYPWEIKGFW VNEGPSVLKR NGKIFITYSA SATDENYCMG LLHIDENADL LDASQWHKSS 250 260 270 280 290 300 NPVMTSCYEH GVYGAGHNSF TLAEDGETVL LVYHARTYTE IEGDPLWDPN RHTYVKALRW 310 DDSGMPVFGK PSIQE

References

[1]

"Complete sequence of Shewanella sp. W3-18-1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., Tiedje J., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: W3-18-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000503 Genomic DNA. Translation: ABM24794.1.
RefSeq	YP_963348.1. NC_008750.1.
3D structure databases
ProteinModelPortal	A1RJE9.
SMR	A1RJE9. Positions 4-312.
ModBase	Search...
Protein-protein interaction databases
STRING	A1RJE9.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4660580.
GenomeReviews	Gene locus Sputw3181_1959 in contig CP000503_GR.
KEGG	shw:Sputw3181_1959.
NMPDR	fig|351745.7.peg.1841.
PATRIC	23597555. VBISheSp103602_2038.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3940.
HOGENOM	HBG348165.
OMA	LIWAPEL.
ProtClustDB	CLSK2397789.
Family and domain databases
InterPro	IPR016828. Alpha-L-arabinofuranosidase. IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KO	K01209.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
PIRSF	PIRSF025414. Alpha-L-arabinofuranosidase. 1 hit.
SUPFAM	SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1RJE9_SHESW

Accession

Primary (citable) accession number: A1RJE9

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)