A1RJE7 (A1RJE7_SHESW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-N-arabinofuranosidase EMBL ABM24792.1
EC=3.2.1.55 EMBL ABM24792.1

Gene names

Ordered Locus Names:

Sputw3181_1957

Organism

Shewanella sp. (strain W3-18-1) [Complete proteome] [HAMAP] EMBL ABM24792.1

Taxonomic identifier

351745 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	369 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABM24792.1
Molecular function	Glycosidase EMBL ABM24792.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-N-arabinofuranosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 43	43	Potential EMBL ABM24792.1
	Chain	44 – 369	326	Potential EMBL ABM24792.1		PRO_5000203999

Sequences

	Sequence		Length	Mass (Da)
	A1RJE7 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 18EEEB210F5DE5BE	FASTA	369	41,306
	10 20 30 40 50 60 MDAKLTMDNI ISKTNAKFGL LSAFITSMLL PVCAASSSPV LALPASQTSV TSSAVQDAPF 70 80 90 100 110 120 IERRADPWVI KDDDGSYYFI ASVPEFDRIE LRHAANIQGL SQAIPKIIWR KHTSGPMSID 130 140 150 160 170 180 IWAPELHKID GRWYIYYAAS DKDRRFHNRM FVLGLEGDNP MKGDWQELGR LKTARDGFSL 190 200 210 220 230 240 DATHFSVGGQ GYFIWAQQDD AKSYNTGLVI AKMLSPTAAS PQEAIISEPL LDWERQGFKV 250 260 270 280 290 300 NEGAAVLVKN GKVFVTYSAS ATDDRYAMGL LWAEQDADLL DPKNWHKVSE PVFSTEPTLN 310 320 330 340 350 360 RFGPGHNSFV LAEDGQTELM FYHARNYLEL QGTPLTDGNR HTYYRAISWT ENGFPVFHNE LADNVVDIK

References

[1]

"Complete sequence of Shewanella sp. W3-18-1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., Tiedje J., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: W3-18-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000503 Genomic DNA. Translation: ABM24792.1.
RefSeq	YP_963346.1. NC_008750.1.
3D structure databases
ProteinModelPortal	A1RJE7.
ModBase	Search...
Protein-protein interaction databases
STRING	A1RJE7.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4660565.
GenomeReviews	Gene locus Sputw3181_1957 in contig CP000503_GR.
KEGG	shw:Sputw3181_1957.
NMPDR	fig|351745.7.peg.1839.
PATRIC	23597551. VBISheSp103602_2036.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3940.
HOGENOM	HBG348165.
OMA	EFDRIEL.
ProtClustDB	CLSK2398341.
Family and domain databases
InterPro	IPR016828. Alpha-L-arabinofuranosidase. IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KO	K01209.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
PIRSF	PIRSF025414. Alpha-L-arabinofuranosidase. 1 hit.
SUPFAM	SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1RJE7_SHESW

Accession

Primary (citable) accession number: A1RJE7

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)