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A1RI61

- GH109_SHESW

UniProt

A1RI61 - GH109_SHESW

Protein

Glycosyl hydrolase family 109 protein

Gene

Sputw3181_1518

Organism
Shewanella sp. (strain W3-18-1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    Glycosidase.By similarity

    Cofactori

    Binds 1 NAD+ per subunit. The NAD cannot dissociate By similarity.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei86 – 861NADBy similarity
    Binding sitei184 – 1841NADBy similarity
    Binding sitei213 – 2131SubstrateBy similarity
    Binding sitei232 – 2321SubstrateBy similarity
    Binding sitei244 – 2441NADBy similarity
    Binding sitei326 – 3261SubstrateBy similarity

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi64 – 652NADBy similarity
    Nucleotide bindingi135 – 1384NADBy similarity
    Nucleotide bindingi155 – 1562NADBy similarity

    GO - Molecular functioni

    1. hydrolase activity, acting on glycosyl bonds Source: UniProtKB-KW
    2. oxidoreductase activity Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Keywords - Ligandi

    NAD

    Enzyme and pathway databases

    BioCyciSSP351745:GCOY-1575-MONOMER.

    Protein family/group databases

    CAZyiGH109. Glycoside Hydrolase Family 109.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycosyl hydrolase family 109 protein (EC:3.2.1.-)
    Gene namesi
    Ordered Locus Names:Sputw3181_1518
    OrganismiShewanella sp. (strain W3-18-1)
    Taxonomic identifieri351745 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000002597: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3131Tat-type signalPROSITE-ProRule annotationAdd
    BLAST
    Chaini32 – 459428Glycosyl hydrolase family 109 proteinPRO_5000203918Add
    BLAST

    Post-translational modificationi

    Predicted to be exported by the Tat system. The position of the signal peptide cleavage has not been experimentally proven.

    Interactioni

    Protein-protein interaction databases

    STRINGi351745.Sputw3181_1518.

    Structurei

    3D structure databases

    ProteinModelPortaliA1RI61.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni244 – 2474Substrate bindingBy similarity

    Sequence similaritiesi

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiNOG125103.
    HOGENOMiHOG000252553.
    OMAiHNIHRRH.
    OrthoDBiEOG61P6MK.

    Family and domain databases

    Gene3Di3.40.50.720. 2 hits.
    InterProiIPR016040. NAD(P)-bd_dom.
    IPR000683. Oxidoreductase_N.
    IPR006311. TAT_signal.
    IPR019546. TAT_signal_bac_arc.
    [Graphical view]
    PfamiPF01408. GFO_IDH_MocA. 1 hit.
    PF10518. TAT_signal. 1 hit.
    [Graphical view]
    PROSITEiPS51318. TAT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A1RI61-1 [UniParc]FASTAAdd to Basket

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    MHNIHRRHFL KAAGAVTAGL ITANITASTH ANSVAPKPQT GKSVIGLIAP    50
    KMDVVRVGFI GVGERGFSHV EQFCHLEGVE LKAICDTHQA VIDRAVAHIA 100
    KQNRPQPTVY TGDDLSYRDL LSRDDIDIVI ISTPWEWHAP MAIETMESGK 150
    HAFVEVPLAL TVEECWQIVD TAERTQKNCM MMENVNYGRE ELMVLNMVRQ 200
    GVFGELLHGE AAYIHELRWQ MKEIDHKTGS WRTYWHTKRN GNLYPTHGLG 250
    PVSQYMNINR GDRFDYLTSM SSPALGRALY AKREFPADHE RNQLKYINGD 300
    INTSLIKTVK GRTIMVQHDT TTPRPYSRHN LIQGTNGVFA GFPNRIAVEH 350
    GGFGKSYHEW DMDMQKWYDK YDHPLWQRIG KEAEINGGHG GMDFVMLWRM 400
    IYCLRNGEAL DQDVYDAASW SVVNILSEQS VNNRSNSVTF PDFTRGAWEH 450
    AKPLGIVGA 459
    Length:459
    Mass (Da):51,985
    Last modified:February 6, 2007 - v1
    Checksum:i29C03823D4C4C1FB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000503 Genomic DNA. Translation: ABM24356.1.
    RefSeqiWP_011788857.1. NC_008750.1.
    YP_962910.1. NC_008750.1.

    Genome annotation databases

    EnsemblBacteriaiABM24356; ABM24356; Sputw3181_1518.
    GeneIDi4661566.
    KEGGishw:Sputw3181_1518.
    PATRICi23596625. VBISheSp103602_1579.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000503 Genomic DNA. Translation: ABM24356.1 .
    RefSeqi WP_011788857.1. NC_008750.1.
    YP_962910.1. NC_008750.1.

    3D structure databases

    ProteinModelPortali A1RI61.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 351745.Sputw3181_1518.

    Protein family/group databases

    CAZyi GH109. Glycoside Hydrolase Family 109.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABM24356 ; ABM24356 ; Sputw3181_1518 .
    GeneIDi 4661566.
    KEGGi shw:Sputw3181_1518.
    PATRICi 23596625. VBISheSp103602_1579.

    Phylogenomic databases

    eggNOGi NOG125103.
    HOGENOMi HOG000252553.
    OMAi HNIHRRH.
    OrthoDBi EOG61P6MK.

    Enzyme and pathway databases

    BioCyci SSP351745:GCOY-1575-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.720. 2 hits.
    InterProi IPR016040. NAD(P)-bd_dom.
    IPR000683. Oxidoreductase_N.
    IPR006311. TAT_signal.
    IPR019546. TAT_signal_bac_arc.
    [Graphical view ]
    Pfami PF01408. GFO_IDH_MocA. 1 hit.
    PF10518. TAT_signal. 1 hit.
    [Graphical view ]
    PROSITEi PS51318. TAT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: W3-18-1.

    Entry informationi

    Entry nameiGH109_SHESW
    AccessioniPrimary (citable) accession number: A1RI61
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 2, 2008
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3