Unreviewed, UniProtKB/TrEMBL A1RC88 (A1RC88_ARTAT)

Names and origin

Protein names

Submitted name:
    Two-component system response regulator EMBL ABM09942.1

Gene names

Ordered Locus Names:

AAur_4184

Organism

Arthrobacter aurescens (strain TC1) [Complete proteome] [HAMAP]

Taxonomic identifier

290340 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter

Protein attributes

Sequence length	218 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707V5 Spearmint SPM000792 Contains 1 response regulatory domain. Spearmint SPM000792

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000707V5 Spearmint SPM000792
Ligand	DNA-binding RuleBase RU000707V5 Spearmint SPM000792
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro two-component signal transduction system (phosphorelay) Inferred from electronic annotation. Source: InterPro
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro transcription factor activity Inferred from electronic annotation. Source: InterPro two-component response regulator activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1RC88-1 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: B833CFB28BC3925E	FASTA	218	22,903
	10 20 30 40 50 60 MSDIRVLLVD DHPVVRAGLR AMLADFPGVT VVAEASEGDA ALVELSKLHT LGEPVDLVLM 70 80 90 100 110 120 DLQMGSGMDG VTATEKIKAG EGGNPPPPVL ILTTYDTDAD ILAAVEAGAS GYMLKDAPPE 130 140 150 160 170 180 QIRQAVLSAA AGQTALAPEV AARLMGRIRN PSPALSGREV QLLELLATGM SNRAMAKQLF 190 200 210 ISEATVKTHL VHIYSKLGVD NRTAAIAVAT QRRIIRGH

References

[1]

"Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1." Mongodin E.F., Shapir N., Daugherty S.C., DeBoy R.T., Emerson J.B., Shvartzbeyn A., Radune D., Vamathevan J., Riggs F., Grinberg V., Khouri H.M., Wackett L.P., Nelson K.E., Sadowsky M.J. PLoS Genet. 2:2094-2106(2006) [PubMed: 17194220] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000474 Genomic DNA. Translation: ABM09942.1.
RefSeq	YP_949850.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	4640186.
GenomeReviews	Gene locus AAur_4184 in contig CP000474_GR.
KEGG	aau:AAur_4184.
TIGR	AAur_4184.
Phylogenomic databases
OMA	A1RC88. ATQRRII.
Family and domain databases
InterPro	IPR001789. Sig_transdc_resp-reg_receiver. IPR000792. Tscrpt_reg_LuxR_C. IPR011991. Wing_hlx_DNA_bd. [Graphical view]
Gene3D	G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
Pfam	PF00196. GerE. 1 hit. PF00072. Response_reg. 1 hit. [Graphical view]
PRINTS	PR00038. HTHLUXR.
ProDom	PD000307. HTH_LuxR. 1 hit. PD000039. Response_reg. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00421. HTH_LUXR. 1 hit. SM00448. REC. 1 hit. [Graphical view]
PROSITE	PS50043. HTH_LUXR_2. 1 hit. PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1RC88_ARTAT

Accession

Primary (citable) accession number: A1RC88

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	June 16, 2009
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)