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A1RBD2 (A1RBD2_ARTAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:AAur_3867 EMBL ABM06459.1
OrganismArthrobacter aurescens (strain TC1) [Complete proteome] [HAMAP] EMBL ABM06459.1
Taxonomic identifier290340 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeArthrobacter

Protein attributes

Sequence length354 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABM06459.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A1RBD2 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 2E0CE7A4AC873E30

FASTA35440,200
        10         20         30         40         50         60 
MDLPVMPPVS PMLAKSVPTI PDVGHYEPKW DGFRTIVFKD GDEIVLGSRN EKPMTRYFPE 

        70         80         90        100        110        120 
VVEALRKNLP DKCVIDGEIV LIEGKRLEFE VLQQRIHPAD SRVRMLAEKT PASMIAFDIL 

       130        140        150        160        170        180 
ALGDENLMDK PFSERRAILE RAFAKAEPPV YVTPAVTDLE QAQEWFVQLE GAGLDGVLSK 

       190        200        210        220        230        240 
PLDGAYQPNK RVMFKTKHER TADCVVAGFR WHKTAKVVGS MLLGLHDDTG RLHHVGVVAS 

       250        260        270        280        290        300 
FPMARREALV AELEPYQVEL SEHPWGEWAN QDETAGGSRM PGAQSRWSGG KDFSFVPLRP 

       310        320        330        340        350 
ELVIEVKYDY MEGDRFRHTT QFRRWRPDRT PESCTYSQLE EPADYDLGEI LRLP 

« Hide

References

[1]"Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1."
Mongodin E.F., Shapir N., Daugherty S.C., DeBoy R.T., Emerson J.B., Shvartzbeyn A., Radune D., Vamathevan J., Riggs F., Grinberg V., Khouri H., Wackett L.P., Nelson K.E., Sadowsky M.J.
PLoS Genet. 2:2094-2106(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TC1 EMBL ABM06459.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000474 Genomic DNA. Translation: ABM06459.1.
RefSeqYP_949544.1. NC_008711.1.

3D structure databases

ProteinModelPortalA1RBD2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290340.AAur_3867.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM06459; ABM06459; AAur_3867.
GeneID4638874.
KEGGaau:AAur_3867.
PATRIC20983294. VBIArtAur67810_3944.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222508.
KOK01971.
OMAERTADCV.
OrthoDBEOG63NMFT.
ProtClustDBPRK08224.

Enzyme and pathway databases

BioCycAAUR290340:GI59-3866-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1RBD2_ARTAT
AccessionPrimary (citable) accession number: A1RBD2
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: April 16, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)