A1RBD2 (A1RBD2_ARTAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative ATP dependent DNA ligase EMBL ABM06459.1

Gene names

Ordered Locus Names:

AAur_3867 EMBL ABM06459.1

Organism

Arthrobacter aurescens (strain TC1) [Complete proteome] [HAMAP] EMBL ABM06459.1

Taxonomic identifier

290340 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter › Arthrobacter aurescens

Protein attributes

Sequence length	354 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABM06459.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1RBD2 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 2E0CE7A4AC873E30	FASTA	354	40,200
	10 20 30 40 50 60 MDLPVMPPVS PMLAKSVPTI PDVGHYEPKW DGFRTIVFKD GDEIVLGSRN EKPMTRYFPE 70 80 90 100 110 120 VVEALRKNLP DKCVIDGEIV LIEGKRLEFE VLQQRIHPAD SRVRMLAEKT PASMIAFDIL 130 140 150 160 170 180 ALGDENLMDK PFSERRAILE RAFAKAEPPV YVTPAVTDLE QAQEWFVQLE GAGLDGVLSK 190 200 210 220 230 240 PLDGAYQPNK RVMFKTKHER TADCVVAGFR WHKTAKVVGS MLLGLHDDTG RLHHVGVVAS 250 260 270 280 290 300 FPMARREALV AELEPYQVEL SEHPWGEWAN QDETAGGSRM PGAQSRWSGG KDFSFVPLRP 310 320 330 340 350 ELVIEVKYDY MEGDRFRHTT QFRRWRPDRT PESCTYSQLE EPADYDLGEI LRLP

References

[1]

"Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1." Mongodin E.F., Shapir N., Daugherty S.C., DeBoy R.T., Emerson J.B., Shvartsbeyn A., Radune D., Vamathevan J., Riggs F., Grinberg V., Khouri H.M., Wackett L.P., Nelson K.E., Sadowsky M.J. PLoS Genet. 2:e214-e214(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TC1 EMBL ABM06459.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000474 Genomic DNA. Translation: ABM06459.1.
RefSeq	YP_949544.1. NC_008711.1.
3D structure databases
ProteinModelPortal	A1RBD2.
ModBase	Search...
Protein-protein interaction databases
STRING	290340.AAur_3867.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABM06459; ABM06459; AAur_3867.
GeneID	4638874.
KEGG	aau:AAur_3867.
PATRIC	20983294. VBIArtAur67810_3944.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000222508.
KO	K01971.
OMA	VERVCEV.
ProtClustDB	PRK08224.
Enzyme and pathway databases
BioCyc	AAUR290340:GI59-4439-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1RBD2_ARTAT

Accession

Primary (citable) accession number: A1RBD2

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)