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Protein
Submitted name:

Putative ATP dependent DNA ligase

Gene

AAur_3867

Organism
Arthrobacter aurescens (strain TC1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciAAUR290340:GI59-3866-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:AAur_3867Imported
OrganismiArthrobacter aurescens (strain TC1)Imported
Taxonomic identifieri290340 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrococcaceaeArthrobacter
ProteomesiUP000000637 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi290340.AAur_3867.

Structurei

3D structure databases

ProteinModelPortaliA1RBD2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1RBD2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLPVMPPVS PMLAKSVPTI PDVGHYEPKW DGFRTIVFKD GDEIVLGSRN
60 70 80 90 100
EKPMTRYFPE VVEALRKNLP DKCVIDGEIV LIEGKRLEFE VLQQRIHPAD
110 120 130 140 150
SRVRMLAEKT PASMIAFDIL ALGDENLMDK PFSERRAILE RAFAKAEPPV
160 170 180 190 200
YVTPAVTDLE QAQEWFVQLE GAGLDGVLSK PLDGAYQPNK RVMFKTKHER
210 220 230 240 250
TADCVVAGFR WHKTAKVVGS MLLGLHDDTG RLHHVGVVAS FPMARREALV
260 270 280 290 300
AELEPYQVEL SEHPWGEWAN QDETAGGSRM PGAQSRWSGG KDFSFVPLRP
310 320 330 340 350
ELVIEVKYDY MEGDRFRHTT QFRRWRPDRT PESCTYSQLE EPADYDLGEI

LRLP
Length:354
Mass (Da):40,200
Last modified:February 6, 2007 - v1
Checksum:i2E0CE7A4AC873E30
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000474 Genomic DNA. Translation: ABM06459.1.
RefSeqiWP_011776469.1. NC_008711.1.

Genome annotation databases

EnsemblBacteriaiABM06459; ABM06459; AAur_3867.
KEGGiaau:AAur_3867.
PATRICi20983294. VBIArtAur67810_3944.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000474 Genomic DNA. Translation: ABM06459.1.
RefSeqiWP_011776469.1. NC_008711.1.

3D structure databases

ProteinModelPortaliA1RBD2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290340.AAur_3867.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABM06459; ABM06459; AAur_3867.
KEGGiaau:AAur_3867.
PATRICi20983294. VBIArtAur67810_3944.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Enzyme and pathway databases

BioCyciAAUR290340:GI59-3866-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TC1Imported.

Entry informationi

Entry nameiA1RBD2_ARTAT
AccessioniPrimary (citable) accession number: A1RBD2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: July 22, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.