A1RAY3 (A1RAY3_ARTAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribulokinase HAMAP MF_00520
EC=2.7.1.16 HAMAP MF_00520

Gene names

Name:	araB HAMAP MF_00520
Ordered Locus Names:	AAur_3709

Organism

Arthrobacter aurescens (strain TC1) [Complete proteome] [HAMAP] EMBL ABM08456.1

Taxonomic identifier

290340 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter

Protein attributes

Sequence length	578 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520
Pathway	Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520
Sequence similarities	Belongs to the ribulokinase family. HAMAP MF_00520

Ontologies

Keywords
Biological process	Arabinose catabolism HAMAP MF_00520 Carbohydrate metabolism
Ligand	ATP-binding HAMAP MF_00520 Nucleotide-binding
Molecular function	Kinase HAMAP MF_00520 EMBL ABM08456.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1RAY3 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: C57C552761FB3BB0	FASTA	578	61,699
	10 20 30 40 50 60 MNTSENIPLD EQFVIGVDYG TLSGRAVVVR VSDGAEIGSG VFEYPHAVVT DNLPGSSQRL 70 80 90 100 110 120 PADWALQVPN DYRDVLRNAV PAAVADAGIN PENVVGIGTD FTACTMVPTT ADGTPLNELE 130 140 150 160 170 180 RFADRPHAFV KLWRHHAAQP QADRINQLAA ERGESWLPRY GGLISSEWEF AKGLQLLEED 190 200 210 220 230 240 PEVYGAMEHW VEAADWIVWQ LCGSYVRNAC TAGYKGIYQD GKYPSQDFLT ALNPDFKDFV 250 260 270 280 290 300 SEKLEHTIGR LGDAAGYLTE EAAAWTGLPA GIAVAVGNVD AHVSAPAANA VEPGQLVAIM 310 320 330 340 350 360 GTSTCHVMNG DVLREVPGMC GVVDGGIVDG LWGYEAGQSG VGDIFGWFTK NGVPPEYHQA 370 380 390 400 410 420 AKDKGLGIHE YLTELAEKQA IGEHGLIALD WHSGNRSVLV DHELSGVVVG QTLATKPEDT 430 440 450 460 470 480 YRALLEATAF GTRTIVDAFR DSGVPVKEFI VAGGLLKNKF LMQVYADITG LQLSTIGSEQ 490 500 510 520 530 540 GPALGSAIHA AVAAGKYKDI REAASSMAAA PGAVYTPIPE NVAAYEVLFQ EYRTLHDYFG 550 560 570 RGTNNVMHRL KAIQRAAIQG SSHNGPAAQA STLEGASA

References

[1]

"Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1." Mongodin E.F., Shapir N., Daugherty S.C., DeBoy R.T., Emerson J.B., Shvartzbeyn A., Radune D., Vamathevan J., Riggs F., Grinberg V., Khouri H.M., Wackett L.P., Nelson K.E., Sadowsky M.J. PLoS Genet. 2:2094-2106(2006) [PubMed: 17194220] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000474 Genomic DNA. Translation: ABM08456.1.
RefSeq	YP_949395.1. NC_008711.1.
3D structure databases
ProteinModelPortal	A1RAY3.
ModBase	Search...
Protein-protein interaction databases
STRING	A1RAY3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4641069.
GenomeReviews	Gene locus AAur_3709 in contig CP000474_GR.
KEGG	aau:AAur_3709.
PATRIC	20982972. VBIArtAur67810_3789.
TIGR	AAur_3709.
Phylogenomic databases
eggNOG	COG1069.
HOGENOM	HBG312681.
OMA	IMEAGDY.
ProtClustDB	PRK04123.
Family and domain databases
HAMAP	MF_00520. Ribulokinase. [Tree]
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018484. Carb_kinase_FGGY_N. IPR005929. L_ribulokin. [Graphical view]
KO	K00853.
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR01234. L-ribulokinase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1RAY3_ARTAT

Accession

Primary (citable) accession number: A1RAY3

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)