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Protein
Submitted name:

Putative ATP-dependent RNA helicase

Gene

AAur_3341

Organism
Arthrobacter aurescens (strain TC1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HelicaseImported, Hydrolase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciAAUR290340:GI59-3340-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent RNA helicaseImported
Gene namesi
Ordered Locus Names:AAur_3341Imported
OrganismiArthrobacter aurescens (strain TC1)Imported
Taxonomic identifieri290340 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrococcaceaePaenarthrobacter
Proteomesi
  • UP000000637 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi290340.AAur_3341.

Structurei

3D structure databases

ProteinModelPortaliA1R9X5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini64 – 259196Helicase ATP-bindingInterPro annotationAdd
BLAST
Domaini299 – 452154Helicase C-terminalInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4107QKT. Bacteria.
COG1205. LUCA.
HOGENOMiHOG000250411.
KOiK06877.
OMAiCIQSPKC.
OrthoDBiEOG6D8B9Q.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR018973. DEAD/DEAH-box_helicase.
IPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR022307. Helicase_put_actinobac.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00270. DEAD. 1 hit.
PF09369. DUF1998. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
TIGRFAMsiTIGR03817. DECH_helic. 1 hit.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1R9X5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAPNSLISL LGRTPDPEQL RHVHTIPARK AVNEPWPDWV HPDVVAAYGT
60 70 80 90 100
LGIHQPYRHQ IQAADLAHSG QHVVIATGTA SGKSLAYQLP ALDAIHRSEL
110 120 130 140 150
RVLSDPGKIH DDGAVTLYLS PTKALAADQL AAIRSLKLPT VRAETYDGDT
160 170 180 190 200
DVSSRRWIRD HANFILANPD MLHFGILPNH TWWARFFRRL RYVIVDEAHS
210 220 230 240 250
YRGVFGSHVA NLMRRLRRIC AYYGAGTSFP EPVFIAASAT ASDPGVSFGR
260 270 280 290 300
LIGAPVREVS EDCSPHGSTT VAFWEPALTD VKGENGAKQR RTAVAETADI
310 320 330 340 350
LANLVSSRVR TIAFIKSRRG AESIASITKR LLDEVDPSLP GRVAAYRSGY
360 370 380 390 400
LPEERRALEQ ALRSGQLLGV SSTSALELGI DISGLDAVLV AGWPGTRASL
410 420 430 440 450
FQQIGRAGRA GQDAIAAFVA SDDPLDTYLV NHPEAIFDVS VEATVFDPGN
460 470 480 490 500
PYVLGPHLCA AAAELPIGPA ELDLFGPTAE GLLDRLVVQG YLRKRPAGWF
510 520 530 540 550
WTHPESAAGM VNLRADGGGP VSIVDAETGS LLGTMDSPQT HYQAHTGAIY
560 570 580 590 600
VHQGDSYLVE DLNEADHCVM VRRVNPDFYT TARDVTQIEV LETSRSVQWG
610 620 630 640 650
DITVHFGDVK VTTQVVSFQR KALISNEILG EEPLDLGARD LFTKAVWFVV
660 670 680 690 700
DNRSLHGAGL VEAEFPGALH AAEHAAIGLL PLVASSDRWD IGGVSTALHA
710 720 730 740 750
DTGVPTIFVY DGHPGGAGFA ERGFEKAKIW LTATREAIKA CECDAGCPSC
760 770 780
VQSPKCGNKN NPLDKAAAIT LLDVLLKDAS
Length:780
Mass (Da):84,033
Last modified:February 6, 2007 - v1
Checksum:i972C5C6E7A758CC3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000474 Genomic DNA. Translation: ABM07076.1.
RefSeqiWP_011775963.1. NC_008711.1.

Genome annotation databases

EnsemblBacteriaiABM07076; ABM07076; AAur_3341.
KEGGiaau:AAur_3341.
PATRICi20982200. VBIArtAur67810_3404.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000474 Genomic DNA. Translation: ABM07076.1.
RefSeqiWP_011775963.1. NC_008711.1.

3D structure databases

ProteinModelPortaliA1R9X5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290340.AAur_3341.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABM07076; ABM07076; AAur_3341.
KEGGiaau:AAur_3341.
PATRICi20982200. VBIArtAur67810_3404.

Phylogenomic databases

eggNOGiENOG4107QKT. Bacteria.
COG1205. LUCA.
HOGENOMiHOG000250411.
KOiK06877.
OMAiCIQSPKC.
OrthoDBiEOG6D8B9Q.

Enzyme and pathway databases

BioCyciAAUR290340:GI59-3340-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR018973. DEAD/DEAH-box_helicase.
IPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR022307. Helicase_put_actinobac.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00270. DEAD. 1 hit.
PF09369. DUF1998. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
TIGRFAMsiTIGR03817. DECH_helic. 1 hit.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TC1Imported.

Entry informationi

Entry nameiA1R9X5_ARTAT
AccessioniPrimary (citable) accession number: A1R9X5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: June 8, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.