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A1R957 (A1R957_ARTAT) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative polysaccharide lyase family 8 EMBL ABM09726.1
Gene names
Ordered Locus Names:AAur_3068
OrganismArthrobacter aurescens (strain TC1) [Complete proteome] [HAMAP] EMBL ABM09726.1
Taxonomic identifier290340 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter

Protein attributes

Sequence length805 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ABM09726.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

carbon-oxygen lyase activity, acting on polysaccharides

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A1R957 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 0DAE97A774AC4C86

FASTA80585,484
        10         20         30         40         50         60 
MSRRTLFRTT GAAALAGVLL SQAGPSFAST DASLQELIDR RRLVLTGGRS AADIPELAAQ 

        70         80         90        100        110        120 
LEGMGKTAEK WWTSMDKTTA RTSLWSDIPL TGIGQSTAAT GNMGLHFNRL YDMALGYAVP 

       130        140        150        160        170        180 
GNPFAGNPAL AADIVAGLQL LSSTAYKPST KAAGNWWFWE IGVPRKTVDI LTLLHAEVPE 

       190        200        210        220        230        240 
ALRTSLLAAV RWFAPNPNWR GRATSLAETG ANRVDKSLAC CMRGILDNNV GDIALGRDAL 

       250        260        270        280        290        300 
SDTVRGGTNS VFTYVSSGDG FYADGSYVQH SYLPYAGTYG VVALAGIAEI IAMLGGSSWA 

       310        320        330        340        350        360 
INDPKRTVLL DAVEDTYAPF VWDGRIMDTI RGRAVSRQRE PDYVSGFGLI SAVLLLAPGC 

       370        380        390        400        410        420 
EEPYRSRFLA LAKGWLERCA DQKLVGHPTQ SLAKSLLSLG VLSDSAVVAA PAPVYSRMFA 

       430        440        450        460        470        480 
DQDRLVHHRP QWGCTVNLSS KRIGRYEWGN SENNLGWYQG DGMTFLYTRQ DPSQFSADFW 

       490        500        510        520        530        540 
PTVDPYALPG TTVTDQVRPS GAGAAGTGIP RAFQAFAGGL TVDGRWGLVG MDHLNHNKTL 

       550        560        570        580        590        600 
SGRKSWFFLD DAVVCLGAGI IGTGGAAVLT TVENRSFAAG TVPALRTDSR NRRMAPGDAA 

       610        620        630        640        650        660 
VQLKRSLHLE GHGGYVFLDA PGVSGTAEVS VVRRTGSWFD INSGADTGGT TDATTRDYVT 

       670        680        690        700        710        720 
VTHRHGVDPA GSGYAYMILP AAGHSTTFSQ SANPDVKVLA NSAEVQMVEV AKEKLVMANF 

       730        740        750        760        770        780 
FAVGTAGGYT SSGPCTLAAH QTGDKLTLSV ADPSRTQPSV RITVDGSWAT LVDTDPGVAL 

       790        800 
VSANPLVLEV QLDGHGHQKN LTLGT

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References

[1]"Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1."
Mongodin E.F., Shapir N., Daugherty S.C., DeBoy R.T., Emerson J.B., Shvartzbeyn A., Radune D., Vamathevan J., Riggs F., Grinberg V., Khouri H.M., Wackett L.P., Nelson K.E., Sadowsky M.J.
PLoS Genet. 2:2094-2106(2006) [PubMed: 17194220] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000474 Genomic DNA. Translation: ABM09726.1.
RefSeqYP_948769.1. NC_008711.1.

3D structure databases

ProteinModelPortalA1R957.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1R957.

Protein family/group databases

CAZyPL8. Polysaccharide Lyase Family 8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4639195.
GenomeReviewsGene locus AAur_3068 in contig CP000474_GR.
KEGGaau:AAur_3068.
PATRIC20981632. VBIArtAur67810_3120.
TIGRAAur_3068.

Phylogenomic databases

eggNOGNOG04835.
HOGENOMHBG699337.
OMATKTYRNI.
ProtClustDBCLSK2784092.

Family and domain databases

InterProIPR008929. Chondroitin_lyas.
IPR011013. Glyco_hydro-type_carb-bd.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR011071. Lyase_8-like_C.
IPR012970. Lyase_8_alpha_N.
IPR004103. Lyase_8_C.
IPR003159. Lyase_8_central_dom.
IPR012329. Lyase_8_N.
IPR006311. TAT_signal.
[Graphical view]
Gene3DG3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit.
G3DSA:2.60.220.10. Lyase_8_C. 1 hit.
G3DSA:1.50.10.100. Lyase_8_N. 1 hit.
KOK01727.
PfamPF02278. Lyase_8. 1 hit.
PF02884. Lyase_8_C. 1 hit.
PF08124. Lyase_8_N. 1 hit.
[Graphical view]
SUPFAMSSF48230. Chondroitin_lyas. 1 hit.
SSF74650. Gal_mut_like. 1 hit.
SSF49863. Lyase_like_C. 1 hit.
PROSITEPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1R957_ARTAT
AccessionPrimary (citable) accession number: A1R957
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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