A1R8T8 (RL16_ARTAT) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L16

Gene names

Name:	rplP
Ordered Locus Names:	AAur_2941

Organism

Arthrobacter aurescens (strain TC1) [Complete proteome] [HAMAP]

Taxonomic identifier

290340 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter

Protein attributes

Sequence length	138 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs By similarity. HAMAP MF_01342
Subunit structure	Part of the 50S ribosomal subunit.
Sequence similarities	Belongs to the ribosomal protein L16P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding tRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro tRNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 138	138	50S ribosomal protein L16 HAMAP MF_01342		PRO_1000054576

Sequences

	Sequence		Length	Mass (Da)
	A1R8T8 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 380DA6923B57A870	FASTA	138	15,423
	10 20 30 40 50 60 MLIPRRVKHR KQHHPGRSGA ATGGTKVSFG EYGIQALSPA YVTNRQIESA RIAMTRHIKR 70 80 90 100 110 120 GGKVWINIYP DRPLTKKPAE TRMGSGKGSP EWWVANVKPG RVLFELSGVN EEVAREALRL 130 AIHKLPLKAR IVRREGGE

References

[1]

"Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1." Mongodin E.F., Shapir N., Daugherty S.C., DeBoy R.T., Emerson J.B., Shvartzbeyn A., Radune D., Vamathevan J., Riggs F., Grinberg V., Khouri H.M., Wackett L.P., Nelson K.E., Sadowsky M.J. PLoS Genet. 2:2094-2106(2006) [PubMed: 17194220] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TC1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000474 Genomic DNA. Translation: ABM06767.1.
RefSeq	YP_948650.1. NC_008711.1.
3D structure databases
ProteinModelPortal	A1R8T8.
SMR	A1R8T8. Positions 1-136.
ModBase	Search...
Protein-protein interaction databases
STRING	A1R8T8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4639277.
GenomeReviews	Gene locus AAur_2941 in contig CP000474_GR.
KEGG	aau:AAur_2941.
PATRIC	20981366. VBIArtAur67810_2991.
TIGR	AAur_2941.
Phylogenomic databases
eggNOG	COG0197.
HOGENOM	HBG286097.
OMA	KGSPEFW.
ProtClustDB	PRK09203.
Enzyme and pathway databases
BioCyc	AAUR290340:AAUR_2941-MONOMER.
Family and domain databases
HAMAP	MF_01342. Ribosomal_L16. [Tree]
InterPro	IPR016180. Ribosomal_L10e/L16. IPR000114. Ribosomal_L16. IPR020798. Ribosomal_L16_CS. [Graphical view]
KO	K02878.
PANTHER	PTHR12220. Ribosomal_L16. 1 hit.
Pfam	PF00252. Ribosomal_L16. 1 hit. [Graphical view]
PRINTS	PR00060. RIBOSOMALL16.
SUPFAM	SSF54686. Ribosomal_L10e/L16. 1 hit.
TIGRFAMs	TIGR01164. RplP_bact. 1 hit.
PROSITE	PS00586. RIBOSOMAL_L16_1. 1 hit. PS00701. RIBOSOMAL_L16_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL16_ARTAT

Accession

Primary (citable) accession number: A1R8T8

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	February 6, 2007
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program