A1R8T6 (A1R8T6_ARTAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
30S ribosomal protein S17 HAMAP MF_01345

Gene names

Name:	rpsQ HAMAP MF_01345
Ordered Locus Names:	AAur_2939

Organism

Arthrobacter aurescens (strain TC1) [Complete proteome] [HAMAP] EMBL ABM07534.1

Taxonomic identifier

290340 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter

Protein attributes

Sequence length	98 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA By similarity. HAMAP MF_01345
Subunit structure	Part of the 30S ribosomal subunit By similarity. HAMAP MF_01345
Sequence similarities	Belongs to the ribosomal protein S17P family. HAMAP MF_01345

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP MF_01345
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_01345 EMBL ABM07534.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1R8T6 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: D40B340B64C23E26	FASTA	98	11,156
	10 20 30 40 50 60 MSEKETVTEA AASAEQRGYR KTRRGYVVSD KMEKTIVVQV EDRVKHALYG KVIRRTSKIK 70 80 90 AHDEENTAGI GDLVLISETR PLSATKRWRL VEILEKAK

References

[1]

"Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1." Mongodin E.F., Shapir N., Daugherty S.C., DeBoy R.T., Emerson J.B., Shvartzbeyn A., Radune D., Vamathevan J., Riggs F., Grinberg V., Khouri H.M., Wackett L.P., Nelson K.E., Sadowsky M.J. PLoS Genet. 2:2094-2106(2006) [PubMed: 17194220] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000474 Genomic DNA. Translation: ABM07534.1.
RefSeq	YP_948648.1. NC_008711.1.
3D structure databases
ProteinModelPortal	A1R8T6.
SMR	A1R8T6. Positions 21-97.
ModBase	Search...
Protein-protein interaction databases
STRING	A1R8T6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4640006.
GenomeReviews	Gene locus AAur_2939 in contig CP000474_GR.
KEGG	aau:AAur_2939.
PATRIC	20981362. VBIArtAur67810_2989.
TIGR	AAur_2939.
Phylogenomic databases
eggNOG	COG0186.
HOGENOM	HBG750455.
OMA	TIRECRP.
ProtClustDB	CLSK960152.
Family and domain databases
HAMAP	MF_01345_B. Ribosomal_S17_B. [Tree]
InterPro	IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR000266. Ribosomal_S17. IPR019984. Ribosomal_S17_bac-type. IPR019979. Ribosomal_S17_CS. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K02961.
PANTHER	PTHR10744. Ribosomal_S17. 1 hit.
Pfam	PF00366. Ribosomal_S17. 1 hit. [Graphical view]
PRINTS	PR00973. RIBOSOMALS17.
ProDom	PD001295. Ribosomal_S17. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR03635. S17_bact. 1 hit.
PROSITE	PS00056. RIBOSOMAL_S17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1R8T6_ARTAT

Accession

Primary (citable) accession number: A1R8T6

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	January 25, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)