A1R8P2 (A1R8P2_ARTAT) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 38.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Malto-oligosyltrehalose trehalohydrolase PIRNR PIRNR006337 Short name=MTHase PIRNR PIRNR006337 EC=3.2.1.141 PIRNR PIRNR006337 Alternative name(s): 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase PIRNR PIRNR006337 Maltooligosyl trehalose trehalohydrolase PIRNR PIRNR006337 | ||||
| Gene names |
| ||||
| Organism | Arthrobacter aurescens (strain TC1) [Complete proteome] [HAMAP] EMBL ABM08308.1 | ||||
| Taxonomic identifier | 290340 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter |
Protein attributes
| Sequence length | 590 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | Hydrolysis of (1->4)-alpha-D-glucosidic linkage in 4-alpha-D-((1->4)-alpha-D-glucanosyl)(n) trehalose to yield trehalose and (1->4)-alpha-D-glucan. PIRNR PIRNR006337 |
| Pathway | Glycan biosynthesis; trehalose biosynthesis. PIRNR PIRNR006337 |
| Subcellular location | Cytoplasm By similarity PIRSR PIRSR006337-1. |
| Sequence similarities | Belongs to the glycosyl hydrolase 13 family. PIRNR PIRNR006337 |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Glycosidase PIRNR PIRNR006337 EMBL ABM08308.1 Hydrolase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | trehalose biosynthetic process Inferred from electronic annotation. Source: InterPro |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | 4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase activity Inferred from electronic annotation. Source: EC cation bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Sites | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Active site | 259 | 1 | Nucleophile By similarity PIRSR PIRSR006337-1 | ||||||
| Active site | 296 | 1 | Proton donor By similarity PIRSR PIRSR006337-1 | ||||||
| Site | 392 | 1 | Transition state stabilizer By similarity PIRSR PIRSR006337-3 | ||||||
Sequences
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References
| [1] | "Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1." Mongodin E.F., Shapir N., Daugherty S.C., DeBoy R.T., Emerson J.B., Shvartzbeyn A., Radune D., Vamathevan J., Riggs F., Grinberg V., Khouri H.M., Wackett L.P., Nelson K.E., Sadowsky M.J. PLoS Genet. 2:2094-2106(2006) [PubMed: 17194220] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000474 Genomic DNA. Translation: ABM08308.1. |
| RefSeq | YP_948604.1. NC_008711.1. |
3D structure databases | |
| ProteinModelPortal | A1R8P2. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | A1R8P2. |
Protein family/group databases | |
| CAZy | CBM48. Carbohydrate-Binding Module Family 48. GH13. Glycoside Hydrolase Family 13. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 4640575. |
| GenomeReviews | Gene locus AAur_2895 in contig CP000474_GR. |
| KEGG | aau:AAur_2895. |
| PATRIC | 20981270. VBIArtAur67810_2943. |
| TIGR | AAur_2895. |
Phylogenomic databases | |
| eggNOG | COG0296. |
| HOGENOM | HBG367595. |
| OMA | PGKRNWG. |
| ProtClustDB | CLSK849609. |
Family and domain databases | |
| InterPro | IPR015902. Alpha_amylase. IPR006047. Glyco_hydro_13_cat_dom. IPR004193. Glyco_hydro_13_N. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. IPR012768. Trehalose_TreZ. [Graphical view] |
| Gene3D | G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits. G3DSA:2.60.40.10. Ig-like_fold. 1 hit. |
| KO | K01236. |
| PANTHER | PTHR10357. Alpha_amylase. 1 hit. PTHR10357:SF21. PTHR10357:SF21. 1 hit. |
| Pfam | PF00128. Alpha-amylase. 2 hits. PF02922. CBM_48. 1 hit. [Graphical view] |
| PIRSF | PIRSF006337. Trehalose_TreZ. 1 hit. |
| SUPFAM | SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit. |
| TIGRFAMs | TIGR02402. Trehalose_TreZ. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | A1R8P2_ARTAT | ||||||||
| Accession | Primary (citable) accession number: A1R8P2 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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