Adenosine deaminase - Arthrobacter aurescens (strain TC1)

Preferred order of sections

Names and origin

Protein names

Submitted name:
Adenosine deaminase EMBL ABM08817.1
EC=3.5.4.4 EMBL ABM08817.1

Gene names

Name:	add EMBL ABM08817.1
Ordered Locus Names:	AAur_1117

Organism

Arthrobacter aurescens (strain TC1) [Complete proteome] [HAMAP] EMBL ABM08817.1

Taxonomic identifier

290340 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter

Protein attributes

Sequence length	343 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	Metal-binding PDB 3RYS Zinc PDB 3RYS
Molecular function	Hydrolase EMBL ABM08817.1
Technical term	3D-structure PDB 3RYS Complete proteome
Gene Ontology (GO)
Biological process	purine ribonucleoside monophosphate biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	adenosine deaminase activity Inferred from electronic annotation. Source: EC metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Sites

Metal binding

19

1

Zinc; via tele nitrogen PDB 3RYS

Metal binding

21

1

Zinc; via tele nitrogen PDB 3RYS

Metal binding

199

1

Zinc; via tele nitrogen PDB 3RYS

Metal binding

280

1

Zinc PDB 3RYS

Sequences

Sequence

Length

Mass (Da)

Tools

A1R3U3 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 334EBF4108AA2A5B
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FASTA

343

37,590

        10         20         30         40         50         60 
METFGEKTTS TAPPVAELHL HIEGTLQPEL IFALAERNGI ELPYEDIEEL REKYEFTDLQ 

        70         80         90        100        110        120 
SFLDLYYANM AVLQTEQDFT DMTRAYLERA AAGGVRHAEI MMDPQAHTSR GVALETCVNG 

       130        140        150        160        170        180 
VANALATSEE DFGVSTLLIA AFLRDMSEDS ALEVLDQLLA MHAPIAGIGL DSAEVGNPPS 

       190        200        210        220        230        240 
KFERLYQRAA EAGLRRIAHA GEEGPASYIT EALDVLHVER IDHGIRCMED TDVVQRLVAE 

       250        260        270        280        290        300 
QVPLTVCPLS NVRLRAVDKL ADHPLPEMLA IGLNVCVNSD DPAYFGGYVD DNFEQLVKVL 

       310        320        330        340 
EFSVPEQATL AANSIRSSFA SDARKAVLLD EVTEWVKASV TPA

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References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1." Mongodin E.F., Shapir N., Daugherty S.C., DeBoy R.T., Emerson J.B., Shvartzbeyn A., Radune D., Vamathevan J., Riggs F., Grinberg V., Khouri H.M., Wackett L.P., Nelson K.E., Sadowsky M.J. PLoS Genet. 2:2094-2106(2006) [PubMed: 17194220] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	"The crystal structure of adenine deaminase (AAur1117) from Arthrobacter aurescens." Zhang Z., Goble A.M., Raushel F.M., Swaminathan S. Submitted (MAY-2011) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) IN COMPLEX WITH ZINC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CP000474 Genomic DNA. Translation: ABM08817.1.

RefSeq

YP_946905.1. NC_008711.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3RYS	X-ray	2.60	A/B	1-343	[»]

ProteinModelPortal

A1R3U3.

ModBase

Search...

Protein-protein interaction databases

STRING

A1R3U3.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

4639471.

GenomeReviews

Gene locus AAur_1117 in contig CP000474_GR.

KEGG

aau:AAur_1117.

PATRIC

20977582. VBIArtAur67810_1133.

TIGR

AAur_1117.

Phylogenomic databases

eggNOG

COG1816.

HOGENOM

HBG630382.

OMA

FGGYVDD.

ProtClustDB

CLSK728324.

Family and domain databases

HAMAP

MF_01962. Adenine_deaminase.
[Tree]

InterPro

IPR001365. A/AMP_deaminase_dom.
IPR006330. A_deaminase.
[Graphical view]

KO

K01488.

PANTHER

PTHR11409:SF21. PTHR11409:SF21. 1 hit.

Pfam

PF00962. A_deaminase. 1 hit.
[Graphical view]

TIGRFAMs

TIGR01430. Aden_deam. 1 hit.

ProtoNet

Search...

Entry information

Entry name

A1R3U3_ARTAT

Accession

Primary (citable) accession number: A1R3U3

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)