Putative Transcriptional regulator, LuxR-family - Arthrobacter aurescens (strain TC1)

Contribute

Read comments (0) or add your own

Unreviewed, UniProtKB/TrEMBL A1R238 (A1R238_ARTAT)

Last modified June 16, 2009. Version 19. History...

Clusters with 100%, 90%, 50% identity |

Third-party data |

Customize display

text xml rdf/xml gff fasta

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Putative Transcriptional regulator, LuxR-family EMBL ABM10243.1

Gene names

Ordered Locus Names:

AAur_0492

Organism

Arthrobacter aurescens (strain TC1) [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter

Protein attributes

Sequence length	424 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707V5

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000707V5
Ligand	DNA-binding RuleBase RU000707V5
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro two-component signal transduction system (phosphorelay) Inferred from electronic annotation. Source: InterPro
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro transcription factor activity Inferred from electronic annotation. Source: InterPro two-component response regulator activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

A1R238-1 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: EBCB801431780C5F
Show »

424

46,091

        10         20         30         40         50         60 
MPQPTDFSWS LLDAIASIAK APLNRIAEEL RAATLPFLAS SALVIFTEDC TGRPQKKAGA 

        70         80         90        100        110        120 
EDIVSRVSIP ELDRLRAAME GEGPWRGPAV IGGQQREVLA FRYTPSNALL VLSDPAPTPT 

       130        140        150        160        170        180 
DEDSAAVRMV TYLWQLAAAR IQEKVSDAPP SYLLESRAAS AERVRVTGEL VDQHSTTLET 

       190        200        210        220        230        240 
VLAALRSNSL DDHAARTFVT DVTVKALVGL RTLNDRTSNL VEEPVATAFE RLREDLRPLM 

       250        260        270        280        290        300 
HFSKIDIQFI EPPANGRALP GEVAHAARAV VRGLVLAIAE QSDVHRVRTQ WDCDGENLLI 

       310        320        330        340        350        360 
NVRDDGGGEL SPEGPTLERL LQRVQAVDGT MTVDIMQGWG ADISVVLPLD PPSTPAGDVA 

       370        380        390        400        410        420 
EWGLAARELE VLQLLAAGQR NRTIATDLGI SENTVKFHLR NLFRKLDVRS RTEAIALAHS 


AGLR

References

[1]

"Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1."
Mongodin E.F., Shapir N., Daugherty S.C., DeBoy R.T., Emerson J.B., Shvartzbeyn A., Radune D., Vamathevan J., Riggs F., Grinberg V., Khouri H.M., Wackett L.P., Nelson K.E., Sadowsky M.J.
PLoS Genet. 2:2094-2106(2006) [PubMed: 17194220] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
	CP000474 Genomic DNA. Translation: ABM10243.1.
RefSeq	YP_946300.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	4638013.
GenomeReviews	Gene locus AAur_0492 in contig CP000474_GR.
KEGG	aau:AAur_0492.
TIGR	AAur_0492.
Phylogenomic databases
OMA	A1R238. ALVIFTE.
Family and domain databases
InterPro	IPR000792. Tscrpt_reg_LuxR_C. IPR011991. Wing_hlx_DNA_bd. [Graphical view]
Gene3D	G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
Pfam	PF00196. GerE. 1 hit. [Graphical view]
PRINTS	PR00038. HTHLUXR.
ProDom	PD000307. HTH_LuxR. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00421. HTH_LUXR. 1 hit. [Graphical view]
PROSITE	PS00622. HTH_LUXR_1. 1 hit. PS50043. HTH_LUXR_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1R238_ARTAT

Accession

Primary (citable) accession number: A1R238

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	June 16, 2009
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information