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A1QYV5 (A1QYV5_BORT9) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length366 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU004247 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site351Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2621Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1331Substrate By similarity HAMAP-Rule MF_01201
Binding site3101Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue351N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
A1QYV5 [UniParc].

Last modified April 14, 2009. Version 1.
Checksum: E4CE49BF650CE4AB

FASTA36642,314
        10         20         30         40         50         60 
MIKNKEIIIN LKNLEYNLTA IKNHIQKREL VATLKADAYG HGLIQTFKFL KEKGINYFGI 

        70         80         90        100        110        120 
FWIDEALKIK KIDKRANVLL YINTDKSAIK NLVKFDITPF VADSQYLSLI EQECRKQNKK 

       130        140        150        160        170        180 
IKVHLKVDVG MNRYGIKIEN ALNLAMQIQN SKLVEFEGVC THLPTTENRK ITQAQIEKFV 

       190        200        210        220        230        240 
HFINELKTKN IKPKFIHASN SEHITNYPIS EKFNMVRPGL ILYGYHPNSN SLNNNLQLKP 

       250        260        270        280        290        300 
VLSLYSKIIF LKKIKKDEQI SYSGLFTAKE DMQIGLLPVG YFDGIPQNTS NNFYCIIRDK 

       310        320        330        340        350        360 
KCFIRGKICM NISIIEIPKD LKINIGEKVE ITSERLSLDI LSKESGMSKY EILCSIGKHE 


KKKYLY 

« Hide

References

[1]"The genome sequence of Borrelia hermsii and Borrelia turicatae: comparative analysis of two agents of endemic N. America relapsing fever."
Porcella S.F., Raffel S.J., Schrumpf M.E., Montgomery B., Smith T., Schwan T.G.
Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 91E135.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000049 Genomic DNA. Translation: AAX17497.1.
RefSeqYP_945167.1. NC_008710.1.

3D structure databases

ProteinModelPortalA1QYV5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING314724.BT0160.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAX17497; AAX17497; BT0160.
GeneID4642191.
KEGGbtu:BT0160.
PATRIC20572001. VBIBorTur92789_0153.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAMAHFADA.
OrthoDBEOG6PP9NJ.
ProtClustDBCLSK507396.

Enzyme and pathway databases

BioCycBTUR314724:GJ88-153-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1QYV5_BORT9
AccessionPrimary (citable) accession number: A1QYV5
Entry history
Integrated into UniProtKB/TrEMBL: April 14, 2009
Last sequence update: April 14, 2009
Last modified: February 19, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)