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Protein
Submitted name:

Gatad2b protein

Gene

Gatad2b

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Gatad2b proteinImported
Submitted name:
Transcriptional repressor p66-betaImported
Gene namesi
Name:Gatad2bImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 3

Organism-specific databases

MGIiMGI:2443225. Gatad2b.

PTM / Processingi

Proteomic databases

PRIDEiA1L3S7.

Expressioni

Gene expression databases

BgeeiENSMUSG00000042390.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000041370.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini399 – 42931GATA-typeInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili160 – 18728Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IQ4W. Eukaryota.
ENOG410ZCNE. LUCA.
GeneTreeiENSGT00390000004097.
HOVERGENiHBG053401.

Family and domain databases

Gene3Di3.30.50.10. 1 hit.
InterProiIPR032346. P66_CC.
IPR000679. Znf_GATA.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PfamiPF00320. GATA. 1 hit.
PF16563. P66_CC. 1 hit.
[Graphical view]
PROSITEiPS50114. GATA_ZN_FINGER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1L3S7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDRMTEDALR LNLLKRSLDP ADERDDVLAK RLKMEGHEAM ERLKMLALLK
60 70 80 90 100
RKDLANLEVP HELPTKQDGS GVKGYEEKLN GNLRPHGDNN RTAGRPGKEN
110 120 130 140 150
INDEPVDMSA RRSEPDRGRL TPSPDIIVLS DNEASSPRSS SRMEERLKAA
160 170 180 190 200
NLEMFKGKGM EERQQLIKQL RDELRLEEAR LVLLKKLRQS QLQKENVVQK
210 220 230 240 250
TPVVQNAASI VQPSPAHVGQ QGLSKLPSRP GAQGIEPQNM RTLQGHSVIR
260 270 280 290 300
SATNTTLPHM LMSQRVIAPN PAQLQGQRGP PKPGIQSSSS VPCQRTTSSA
310 320 330 340 350
IYMNLASHIQ PGTVNRVSSP LPSPSAMSDA ANSQAAAKLA LRKQLEKTLL
360 370 380 390 400
EIPPPKPPAP LLHFLPSAAN SEFIYMVGLE EVVQSVIDSQ GKNCASLLRV
410 420 430 440 450
EPFVCAQCRT DFTPHWKQEK NGKILCEQCM TSNQKKALKA EHTNRLKNAF
460 470 480 490 500
VKALQQEQEI EQRLQQQAAL SPTTAPAVSS VSKQETIMRH HTLRQAPQPQ
510 520 530 540 550
SSLQRGIPTS ARSMLSNFAQ APQLSVPGGL LGMPGVNIAY LNTGIGGHKA
560 570
PSLADRQREY LLDMIPPRSI SQSISGQK
Length:578
Mass (Da):63,639
Last modified:February 6, 2007 - v1
Checksum:iDBB98965E3DBF641
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC119825 Genomic DNA. No translation available.
AC145082 Genomic DNA. No translation available.
BC130262 mRNA. Translation: AAI30263.1.
UniGeneiMm.270999.

Genome annotation databases

EnsembliENSMUST00000197988; ENSMUSP00000143085; ENSMUSG00000042390.
UCSCiuc012csw.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC119825 Genomic DNA. No translation available.
AC145082 Genomic DNA. No translation available.
BC130262 mRNA. Translation: AAI30263.1.
UniGeneiMm.270999.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000041370.

Proteomic databases

PRIDEiA1L3S7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000197988; ENSMUSP00000143085; ENSMUSG00000042390.
UCSCiuc012csw.1. mouse.

Organism-specific databases

MGIiMGI:2443225. Gatad2b.

Phylogenomic databases

eggNOGiENOG410IQ4W. Eukaryota.
ENOG410ZCNE. LUCA.
GeneTreeiENSGT00390000004097.
HOVERGENiHBG053401.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000042390.

Family and domain databases

Gene3Di3.30.50.10. 1 hit.
InterProiIPR032346. P66_CC.
IPR000679. Znf_GATA.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PfamiPF00320. GATA. 1 hit.
PF16563. P66_CC. 1 hit.
[Graphical view]
PROSITEiPS50114. GATA_ZN_FINGER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA1L3S7_MOUSE
AccessioniPrimary (citable) accession number: A1L3S7
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: September 7, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.