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Protein
Submitted name:

Stem-loop-binding protein 2

Gene

slbp2

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Stem-loop-binding protein 2Imported
Submitted name:
Zgc:158856Imported
Gene namesi
Name:slbp2Imported
ORF Names:zgc:158856Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 21

Organism-specific databases

ZFINiZDB-GENE-070112-1722 slbp2

Expressioni

Gene expression databases

BgeeiENSDARG00000069428

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000091825

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini132 – 198SLBP_RNA_bindInterPro annotationAdd BLAST67

Phylogenomic databases

eggNOGiKOG3934 Eukaryota
ENOG41122ZE LUCA
GeneTreeiENSGT00390000008738
KOiK18710
OMAiSILERCI
OrthoDBiEOG091G0LT8
TreeFamiTF316521

Family and domain databases

Gene3Di1.10.8.1120, 1 hit
InterProiView protein in InterPro
IPR026502 SLBP1/SLBP2
IPR029344 SLBP_RNA_bind
IPR038294 SLBP_RNA_bind_sf
PANTHERiPTHR17408 PTHR17408, 1 hit
PfamiView protein in Pfam
PF15247 SLBP_RNA_bind, 1 hit

Sequencei

Sequence statusi: Complete.

A1L2F4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTRIESLLQ SPFESRLGLP LHLWPTDVAQ DFSSKTLSLP CSPEPWLLPG
60 70 80 90 100
CSSVYDSLVS CSKTPLSASQ NGEKPSAVQK PRRSSILERC ILRMSTASVA
110 120 130 140 150
VGTEDLDGVK RSPSRGKWYP HNADPSHFEI NEAVLKRRQK QIQYGKNTCG
160 170 180 190 200
YQNYVQQVPK RLRVPGIHPS TPNKYRKYSR RSWDMQVRLW RRALHAWDLP
210 220 230 240 250
SASQNDTEGQ DPVDQLQSLL EKMNTELSDG GEKEDMKWEM APDSMTSIIS
260 270 280 290 300
QPSEISTDGP WLASNALQIG ASSHLNQSSQ HGLGYTFSNQ QTAQENVLGW
310 320
LRFLLETDHN QTQAPLLPEE PFWRIA
Length:326
Mass (Da):36,787
Last modified:February 6, 2007 - v1
Checksum:i638E58E13ED91D0A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT027639 Genomic DNA No translation available.
CU462984 Genomic DNA No translation available.
BC129495 mRNA Translation: AAI29496.1
RefSeqiNP_001073645.1, NM_001080176.1
UniGeneiDr.79802

Genome annotation databases

EnsembliENSDART00000101051; ENSDARP00000091825; ENSDARG00000069428
GeneIDi558918
KEGGidre:558918

Similar proteinsi

Entry informationi

Entry nameiA1L2F4_DANRE
AccessioniPrimary (citable) accession number: A1L2F4
Entry historyiIntegrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: March 28, 2018
This is version 66 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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