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A1L2C1 (A1L2C1_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified October 19, 2011. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:pnkd ZFIN ZDB-GENE-050208-278
Synonyms:im:7147352 ZFIN ZDB-GENE-050208-278
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL AAI29447.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Protein attributes

Sequence length343 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAI29447.1

Sequences

Sequence LengthMass (Da)Tools
A1L2C1 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: EA32C997FC8E7E11

FASTA34338,946
        10         20         30         40         50         60 
GFYICRVVKC ARKSAWKNSQ IAKLMARSEK PLFWIAYSLY TRTKLGYIFH KRQMKKARER 

        70         80         90        100        110        120 
YPTGHSRAQP TIINGIKIIP VPILLDNYSY VVIDTASNTA VVVDPADPQP VQACLEAEGV 

       130        140        150        160        170        180 
ALQAVLCTHK HWDHSGGNRA LKRRYSSCRV YGNAMDNIPG LTHPLLDKDT IDFGTQLHFR 

       190        200        210        220        230        240 
AFYTPGHTVG HMIYLLDGRA IGGPSSLFSG DLVFLSGCGR MFEGNASTML SSLDTVGSLN 

       250        260        270        280        290        300 
DDTLLWPGHE YAEDNLLFAA DVEPGNVVRE QKLQWVLQQR SQRLCTCPST LLEEKQYNPF 

       310        320        330        340 
LRSHSQDLHQ ALGLQQKQDE DWTSYRARVL EELRRRKDIY KDR 

« Hide

References

[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Ovary EMBL AAI29447.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC129446 mRNA. Translation: AAI29447.1.
IPIIPI00509260.
UniGeneDr.133976.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

ZFINZDB-GENE-050208-278. pnkd.

Phylogenomic databases

eggNOGfiNOG04036.
GeneTreeENSGT00530000063033.
HOGENOMHBG753931.
HOVERGENHBG001152.
InParanoidA1L2C1.
OMAHQDCRVY.
OrthoDBEOG412M5W.
PhylomeDBA1L2C1.

Gene expression databases

BgeeA1L2C1.

Family and domain databases

HAMAPMF_01374. Glyoxalase_2.
[Tree]
InterProIPR001279. Beta-lactamas-like.
IPR017782. Hydroxyacylglutathione_Hdrlase.
[Graphical view]
PANTHERPTHR11935:SF7. PTHR11935:SF7. 1 hit.
PfamPF00753. Lactamase_B. 1 hit.
[Graphical view]
SMARTSM00849. Lactamase_B. 1 hit.
[Graphical view]
TIGRFAMsTIGR03413. GSH_gloB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1L2C1_DANRE
AccessionPrimary (citable) accession number: A1L2C1
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: October 19, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)