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Protein
Submitted name:

Glucocorticoid induced transcript 1

Gene

glcci1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  • glomerular filtration Source: ZFIN
  • glomerular visceral epithelial cell development Source: ZFIN
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Glucocorticoid induced transcript 1Imported
Gene namesi
Name:glcci1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-031010-41. glcci1.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: ZFIN
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiA1L1Q3.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000035581.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IEAU. Eukaryota.
ENOG4111PY2. LUCA.
HOGENOMiHOG000252927.
HOVERGENiHBG079782.

Family and domain databases

InterProiIPR026639. Glcci1.
IPR026642. Glcci1/FAM117.
[Graphical view]
PANTHERiPTHR14972. PTHR14972. 1 hit.
PTHR14972:SF3. PTHR14972:SF3. 1 hit.
PfamiPF15388. FAM117. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1L1Q3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSASPVHSAR VRRSNDGSPI NTSSSASSSS SSSSTGNTSR LQPIRATVPY
60 70 80 90 100
QLLRGNQHSP TRPPASFSTP SSSSSISVGS NTEPTASAQH SNSTPGSPTL
110 120 130 140 150
ASPAGSASLD GRLIPRQRRS PPEHRSSPER CPHSPVLRAV ERSKSQQVRS
160 170 180 190 200
TGAIRRTSSL GAITGPYLIG QWPRESHLHN PLCMKDKSTQ TPGCWSDESE
210 220 230 240 250
EKRSTHQRSA SWGSSDHLKE IAKLRLQLQR NKQGGGRQCK DSKECLSPLH
260 270 280 290 300
CCTSTTTITA TTISTASQAP LSMSKSAQMP LSNITVPKPS ISRVPSSMEG
310 320 330 340 350
INHELEKVFI KDNGEKEELK ALEVPDGRRA PFPPQQRSSS SRGIDTQTPS
360 370 380 390 400
VPGRSSSCSS LSPCPSPACP PRSHDGSPYS TDEMLDDRDK DSGSSSPLPK
410 420 430 440 450
FASSPKPNNS YMFKREPPEG CEKIKVFEEM TSRQSTTVPL FSCPDKNKVN
460 470 480 490 500
FIPTGSAFCP VKLPGSMLQH SSSQQEDEER EPTQAGPSAP HHHMPTQVST
510 520 530
STSTDDPPES PSQQQEAPSE SGSQPQNFEV S
Length:531
Mass (Da):57,054
Last modified:February 6, 2007 - v1
Checksum:i0352BF56265BA8C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC129170 mRNA. Translation: AAI29171.1.
RefSeqiNP_001073419.1. NM_001079950.1.
UniGeneiDr.85548.

Genome annotation databases

GeneIDi378997.
KEGGidre:378997.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC129170 mRNA. Translation: AAI29171.1.
RefSeqiNP_001073419.1. NM_001079950.1.
UniGeneiDr.85548.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000035581.

Proteomic databases

PaxDbiA1L1Q3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi378997.
KEGGidre:378997.

Organism-specific databases

CTDi113263.
ZFINiZDB-GENE-031010-41. glcci1.

Phylogenomic databases

eggNOGiENOG410IEAU. Eukaryota.
ENOG4111PY2. LUCA.
HOGENOMiHOG000252927.
HOVERGENiHBG079782.

Family and domain databases

InterProiIPR026639. Glcci1.
IPR026642. Glcci1/FAM117.
[Graphical view]
PANTHERiPTHR14972. PTHR14972. 1 hit.
PTHR14972:SF3. PTHR14972:SF3. 1 hit.
PfamiPF15388. FAM117. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA1L1Q3_DANRE
AccessioniPrimary (citable) accession number: A1L1Q3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: June 8, 2016
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.