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A1L1C6 (A1L1C6_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
LRRC7 protein EMBL AAI28990.1
Gene names
Name:LRRC7 EMBL AAI28990.1
OrganismHomo sapiens (Human) EMBL AAI28990.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length821 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 PDZ (DHR) domain. RuleBase RU003354

Sequences

Sequence LengthMass (Da)Tools
A1L1C6 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 5ADB2F3F7B00705A

FASTA82191,722
        10         20         30         40         50         60 
MTKMLGKLRI APSFPQPLDS KPLLSQREAV PPGNIPQRPD RLPMSDTFTD NWTDGSHYDN 

        70         80         90        100        110        120 
TGFVAEETTA ENANSNPLLS SKSRSTSSHG RRPLIRQDRI VGVPLELEQS THRHTPETEV 

       130        140        150        160        170        180 
PPSNPWQNWT RTPSPFEDRT AFPSKLETTP TTSPLPERKE HIKESTEIPS PFSPGVPWEY 

       190        200        210        220        230        240 
HDSNPNRSLS NVFSQIHSRP ESSKGVISIS KSTERLSPLM KDIKSNKFKK SQSIDEIDIG 

       250        260        270        280        290        300 
TYKVYNIPLE NYASGSDHLG SHERPDKMLG PEHGMSSMSR SQSVPMLDDE MLTYGSSKGP 

       310        320        330        340        350        360 
QQQKASMTKK VYQFDQSFNP QGSVEVKAEK RIPPPFQHNP EYVQQASKNI AKDLISPRAY 

       370        380        390        400        410        420 
RGYPPMEQMF SFSQPSVNED AVVNAQFASQ GARAGFLRRA DSLVSATEMA MFRRVNEPHE 

       430        440        450        460        470        480 
LPPTDRYGRP PYRGGLDRQS SVTVTESQFL KRNGRYEDEH PSYQEVKAQA GSFPVKNLTQ 

       490        500        510        520        530        540 
RRPLSARSYS TESYGASQTR PVSARPTMAA LLEKIPSDYN LGNYGDKPSD NSDLKTRPTP 

       550        560        570        580        590        600 
VKGEESCGKM PADWRQQLLR HIEARRLDRN AAYKHNTVNL GMLPYGGISA MHAGRSMTLN 

       610        620        630        640        650        660 
LQTKSKFDHQ ELPLQKTPSQ QSNILDNGQE DVSPSGQWNP YPLGRRDVPP DTITKKAGSH 

       670        680        690        700        710        720 
IQTLMGSQSL QHRSREQQPY EGNINKVTIQ QFQSPLPIQI PSSQATRGPQ PGRCLIQTKG 

       730        740        750        760        770        780 
QRSMDGYPEQ FCVRIEKNPG LGFSISGGIS GQGNPFKPSD KGIFVTRVQP DGPASNLLQP 

       790        800        810        820 
GDKILQANGH SFVHMEHEKA VLLLKSFQNT VDLVIQRELT V

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: PCR rescued clones EMBL AAI28990.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC128989 mRNA. Translation: AAI28990.1.
IPIIPI00426267.
UniGeneHs.479658.

3D structure databases

ProteinModelPortalA1L1C6.
SMRA1L1C6. Positions 729-820.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1L1C6.

Proteomic databases

PRIDEA1L1C6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG079767.

Family and domain databases

InterProIPR001478. PDZ.
[Graphical view]
PfamPF00595. PDZ. 1 hit.
[Graphical view]
SMARTSM00228. PDZ. 1 hit.
[Graphical view]
SUPFAMSSF50156. PDZ. 1 hit.
PROSITEPS50106. PDZ. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSLRRC7. human.
NextBio35460517.

Entry information

Entry nameA1L1C6_HUMAN
AccessionPrimary (citable) accession number: A1L1C6
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: April 3, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
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