Reviewed, UniProtKB/Swiss-Prot A1K9D7 (RPIA_AZOSB)

Names and origin

Protein names

Recommended name:
    Ribose-5-phosphate isomerase A
    EC=5.3.1.6
Alternative name(s):
    Phosphoriboisomerase A
      Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	azo2826

Organism

Azoarcus sp. (strain BH72) [Complete proteome] [HAMAP]

Taxonomic identifier

62928 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Rhodocyclales › Rhodocyclaceae › Azoarcus

Protein attributes

Sequence length	222 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 222	222	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_1000016901

Sequences

	Sequence		Length	Mass (Da)
	A1K9D7-1 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: BEEC6B70377339C0	FASTA	222	23,290
	10 20 30 40 50 60 MTQDELKKAA ALAALDYVED GMIVGVGTGS TVNHFIDGLA GIKHRIRGAV SSSEASSKRL 70 80 90 100 110 120 AAHGIALLDL NDVDELPVYI DGADEIDHGF AMIKGGGGAL TREKIVAAVA RRFVCICDES 130 140 150 160 170 180 KRVDVLGRFP LPIEVIPMAR SQVMRAAAAL GATPRLREGF VTDNGNLIID LHGLSITDPC 190 200 210 220 ATEQALNAVV GVVTNGLFAA RGADTLLLAS AQGVRRFERS AT

References

[1]

"Complete genome of the mutualistic, N2-fixing grass endophyte Azoarcus sp. strain BH72." Krause A., Ramakumar A., Bartels D., Battistoni F., Bekel T., Boch J., Boehm M., Friedrich F., Hurek T., Krause L., Linke B., McHardy A.C., Sarkar A., Schneiker S., Syed A.A., Thauer R., Vorhoelter F.-J., Weidner S. , Puehler A., Reinhold-Hurek B., Kaiser O., Goesmann A. Nat. Biotechnol. 24:1385-1391(2006) [PubMed: 17057704] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	AM406670 Genomic DNA. Translation: CAL95442.1.
RefSeq	YP_934329.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A1K9D7.
Genome annotation databases
GeneID	4609258.
GenomeReviews	Gene locus azo2826 in contig AM406670_GR.
KEGG	azo:azo2826.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	ADKFICI.
Family and domain databases
HAMAP	MF_00170. [Tree]
InterPro	IPR004788. RpiA. [Graphical view]
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
ProDom	PD005813. RpiA. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR00021. rpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_AZOSB

Accession

Primary (citable) accession number: A1K9D7

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	February 6, 2007
Last modified:	November 3, 2009
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)