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A1K6A3 (A1K6A3_AZOSB) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:azo1741 EMBL CAL94358.1
OrganismAzoarcus sp. (strain BH72) [Complete proteome] [HAMAP] EMBL CAL94358.1
Taxonomic identifier62928 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeAzoarcus

Protein attributes

Sequence length881 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A1K6A3 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 9003C30D61806A82

FASTA88196,733
        10         20         30         40         50         60 
MKAHDKRRDE ARGMKPGAIA ALAEYARKRD FSITAEPPVR GARPRAEGAL GFVVQKHAAR 

        70         80         90        100        110        120 
RLHYDFRLEL DGTLKSWAIP KGPSLDPRVK RLAVHVEDHP LDYADFEGRI PQGQYGGGDV 

       130        140        150        160        170        180 
IVWDRGLWQP RDPDPAAAYR AGKLSFHLLG EKLSGGWTLV RTRDGGSGDK AQWLLIKDAD 

       190        200        210        220        230        240 
GAARPQSDYD VVVARPESVL THAQLPARRD AAGAAGGEGA KKARVAALRG DAARNPAWIA 

       250        260        270        280        290        300 
PELATAVEAP PPGEWRYELK FDGYRMLARV ENGRARLYTR NHHDWTAKLA PLREAVESLG 

       310        320        330        340        350        360 
ADSAWLDGEV VVTDAQGVPD FQALQNALEL GRDADLRYFL FDLPYLDGED LRKLPLEARR 

       370        380        390        400        410        420 
ARLRALLGAH DHPRLAYSED FPVPPQDILA SACELRIEGV IGKRAGSPYR SVRSTDWIKL 

       430        440        450        460        470        480 
KCRQRQEFVI VGYSAPQGGR QGFGALLLAV HDEAAGGRLR YAGKVGSGFS GASLKALHQR 

       490        500        510        520        530        540 
MQPLRRPTPA LALPVDSSVT RGATWLEPRL LCEVAFAMWT RDGLVRHAVF QGLRDDKPAA 

       550        560        570        580        590        600 
DAVRERALPA TAVARIQGDG RDDEDAPAPT AKVPSNGVRA GARRSPGTLA GVAISNPDRV 

       610        620        630        640        650        660 
IDAASGVTKG ELATFYCRIG AQLLPHLAGR PLSILRAPTG IDGERFFQRH ADKMSMAGVH 

       670        680        690        700        710        720 
LLPPDLDPDG ERLMMVDTLE GVVGAAQMGT IEFHTWNATA DRIERPDRIV FDLDPDPALP 

       730        740        750        760        770        780 
WSRMVEATRL VLTLLDEIGL DAFLKTSGGK GIHVVVPLAR RHDWEALKQF SRAVTRHLAR 

       790        800        810        820        830        840 
ILPQRFADRM GPQNRVGRIF VDYLRNQRAA STVSAYSVRA RPGLAVSVPI TRQELERIDG 

       850        860        870        880 
ADQWTVRNLH ERLARLTRDP WEGYANRQVI SAAMRAAVAA D 

« Hide

References

[1]"Complete genome of the mutualistic, N2-fixing grass endophyte Azoarcus sp. strain BH72."
Krause A., Ramakumar A., Bartels D., Battistoni F., Bekel T., Boch J., Boehm M., Friedrich F., Hurek T., Krause L., Linke B., McHardy A.C., Sarkar A., Schneiker S., Syed A.A., Thauer R., Vorhoelter F.-J., Weidner S. expand/collapse author list , Puehler A., Reinhold-Hurek B., Kaiser O., Goesmann A.
Nat. Biotechnol. 24:1385-1391(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BH72 EMBL CAL94358.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM406670 Genomic DNA. Translation: CAL94358.1.
RefSeqYP_933245.1. NC_008702.1.

3D structure databases

ProteinModelPortalA1K6A3.
SMRA1K6A3. Positions 589-877.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING62928.azo1741.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAL94358; CAL94358; azo1741.
GeneID4607015.
KEGGazo:azo1741.
PATRIC21011878. VBIAzoSp26047_1777.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMANGLPDFQ.
OrthoDBEOG661H49.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1K6A3_AZOSB
AccessionPrimary (citable) accession number: A1K6A3
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 14, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)