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Protein
Submitted name:

Putative citrate chemoreceptor protein

Gene

tcp

Organism
Azoarcus sp. (strain BH72)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative citrate chemoreceptor proteinImported
Gene namesi
Name:tcpImported
Ordered Locus Names:azo1454Imported
OrganismiAzoarcus sp. (strain BH72)Imported
Taxonomic identifieri62928 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeAzoarcus
Proteomesi
  • UP000002588 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei165 – 191HelicalSequence analysisAdd BLAST27
Transmembranei211 – 235HelicalSequence analysisAdd BLAST25

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi62928.azo1454.

Structurei

3D structure databases

ProteinModelPortaliA1K5G6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 49PAS (PER-ARNT-SIM)InterPro annotationAdd BLAST26
Domaini233 – 285HAMPInterPro annotationAdd BLAST53
Domaini455 – 507HAMPInterPro annotationAdd BLAST53
Domaini512 – 741Methyl-accepting transducerInterPro annotationAdd BLAST230

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK03406.
OMAiFYWVEAN.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 2 hits.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR000014. PAS.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF08447. PAS_3. 1 hit.
PF13188. PAS_8. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 3 hits.
SM00283. MA. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1K5G6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTADVTQRE IEVLPHQSLV SKTDLDGRIT YASPDFIEIS GFSEQELIGA
60 70 80 90 100
KHNVVRHPDM PAEVFEDMWR DLLAGRPWSG IIKNRCRNGD HYWVEGNAAP
110 120 130 140 150
IVENGRVVGF MSVRGRASRE QVAAAEQNYR LFREGRAGHR RVRHGRVVSG
160 170 180 190 200
RLGGRLVRGF RDLPLGIKLG IALTLISLLA VVVAASGWLG IGHALDGSTV
210 220 230 240 250
GGEGEIAFYR NAMLASVVLL LAAAAGALTL VVTTVRRPLR EARQAFALMA
260 270 280 290 300
EGRFHSEFDI SRDDEFGRLL QQLKSMQTRL GYEMQEQQRL LAENRRIRQA
310 320 330 340 350
LDCVDTNVRI ADNGGRVIYA NRALMRTLRR LEPELRQSLP GFAADRFVGS
360 370 380 390 400
SIGDMYADPR EALQRLAGLR ETGRIEMPIG RRMFIVTTNP ILDEQGNKLG
410 420 430 440 450
TVGEWRDRTE EIAAEQALTG LVEAAAAGDF SRRLPVENKS GFFLQLAEGL
460 470 480 490 500
NRLMGEISGS VDAVARVLNA VARGDLTERI EGEYRGTFGQ LQHDANATVL
510 520 530 540 550
RLREVVGRIQ DSAVAINRAA REIAAGNGEL STRTEQQASA LEETASSMEE
560 570 580 590 600
LSATVRQTAD NARAANGLAL GAHAVAGRGG EAMRRVVSTM GEIEHSARKI
610 620 630 640 650
GDIVGVIDAL AFQTNILALN AAVEAARAGE QGRGFAVVAA EVRSLAQRSA
660 670 680 690 700
QSAREVKALI GESVERVEHG VKLVDDAGRT VDEVVSAFGQ VAALMSEIAG
710 720 730 740 750
ASGEQSAGIG QVTMSIGQMD EMTQHNAALV EEAAAAAISL EEQARELVDA
760 770 780 790 800
VGVFRVGKED EPAREPAAHG GLPQPPVLRH NAAQGHAGSE SAGATAPLVE
810 820 830 840
QDMPMAPAPR PAARRGALPK VRRSPAPKPK RPLDEEWEEF
Length:840
Mass (Da):90,677
Last modified:February 6, 2007 - v1
Checksum:i0580EF879107BD2F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM406670 Genomic DNA. Translation: CAL94071.1.
RefSeqiWP_011765187.1. NC_008702.1.

Genome annotation databases

EnsemblBacteriaiCAL94071; CAL94071; azo1454.
KEGGiazo:azo1454.
PATRICi21011274. VBIAzoSp26047_1481.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM406670 Genomic DNA. Translation: CAL94071.1.
RefSeqiWP_011765187.1. NC_008702.1.

3D structure databases

ProteinModelPortaliA1K5G6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi62928.azo1454.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAL94071; CAL94071; azo1454.
KEGGiazo:azo1454.
PATRICi21011274. VBIAzoSp26047_1481.

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK03406.
OMAiFYWVEAN.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 2 hits.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR000014. PAS.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF08447. PAS_3. 1 hit.
PF13188. PAS_8. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 3 hits.
SM00283. MA. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA1K5G6_AZOSB
AccessioniPrimary (citable) accession number: A1K5G6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: October 5, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.