A1K5E7 (A1K5E7_AZOSB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA-(Apurinic or apyrimidinic site) lyase EMBL CAL94052.1
EC=4.2.99.18 EMBL CAL94052.1

Gene names

Name:	nth EMBL CAL94052.1
Ordered Locus Names:	azo1435 EMBL CAL94052.1

Organism

Azoarcus sp. (strain BH72) [Complete proteome] [HAMAP] EMBL CAL94052.1

Taxonomic identifier

62928 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Rhodocyclales › Rhodocyclaceae › Azoarcus

Protein attributes

Sequence length	213 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL CAL94052.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	base-excision repair Inferred from electronic annotation. Source: InterPro
Molecular_function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA-(apurinic or apyrimidinic site) lyase activity Inferred from electronic annotation. Source: EC endonuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1K5E7 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: AB75BE131AF3AF1A	FASTA	213	23,531
	10 20 30 40 50 60 MALMKREAIQ EFFSRLAAAN PEPKTELEYQ TPYQLLVAVV LSAQATDKSV NLATRKLFAA 70 80 90 100 110 120 APTPEAMLAL GEEGVADYIK TIGLFRNKAK NTVALSRLLL ERHGGEVPRD REALEALPGV 130 140 150 160 170 180 GRKTANVVLN TIFREPAMAV DTHIFRLANR TGLAPGKDVM AVEQSLLKRV PKAFLLDAHH 190 200 210 WLILHGRYVC TARKPNCAAC IVRDLCLFRD KTA

References

[1]

"Complete genome of the mutualistic, N2-fixing grass endophyte Azoarcus sp. strain BH72." Krause A., Ramakumar A., Bartels D., Battistoni F., Bekel T., Boch J., Boehm M., Friedrich F., Hurek T., Krause L., Linke B., McHardy A.C., Sarkar A., Schneiker S., Syed A.A., Thauer R., Vorhoelter F.-J., Weidner S. , Puehler A., Reinhold-Hurek B., Kaiser O., Goesmann A. Nat. Biotechnol. 24:1385-1391(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BH72 EMBL CAL94052.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM406670 Genomic DNA. Translation: CAL94052.1.
RefSeq	YP_932939.1. NC_008702.1.
3D structure databases
ProteinModelPortal	A1K5E7.
SMR	A1K5E7. Positions 4-211.
ModBase	Search...
Protein-protein interaction databases
STRING	62928.azo1435.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAL94052; CAL94052; azo1435.
GeneID	4606859.
KEGG	azo:azo1435.
PATRIC	21011234. VBIAzoSp26047_1461.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0177.
HOGENOM	HOG000252206.
KO	K10773.
OMA	NNKSKHL.
ProtClustDB	CLSK766896.
Family and domain databases
Gene3D	1.10.1670.10. 1 hit. 1.10.340.30. 1 hit.
InterPro	IPR011257. DNA_glycosylase. IPR005759. Endonuclease-III_Nth. IPR003651. Endouclease3_FeS-loop_motif. IPR003265. HhH-GPD_domain. IPR000445. HhH_motif. IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif. IPR023170. HTH_base_excis_C. [Graphical view]
Pfam	PF10576. EndIII_4Fe-2S. 1 hit. PF00633. HHH. 1 hit. PF00730. HhH-GPD. 1 hit. [Graphical view]
PIRSF	PIRSF001435. Nth. 1 hit.
SMART	SM00478. ENDO3c. 1 hit. SM00525. FES. 1 hit. SM00278. HhH1. 1 hit. [Graphical view]
SUPFAM	SSF48150. DNA_glycsylse. 1 hit.
TIGRFAMs	TIGR01083. nth. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1K5E7_AZOSB

Accession

Primary (citable) accession number: A1K5E7

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)