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A1K4Z9 (A1K4Z9_AZOSB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Aminomethyltransferase RuleBase RU003981
EC=2.1.2.10 RuleBase RU003981
Gene names
Name:gcvT EMBL CAL93904.1
Ordered Locus Names:azo1287
OrganismAzoarcus sp. (strain BH72) [Complete proteome] [HAMAP]
Taxonomic identifier62928 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Rhodocyclales › Rhodocyclaceae › Azoarcus

Protein attributes

Sequence length335 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

The glycine cleavage system catalyzes the degradation of glycine By similarity. RuleBase RU003981

Catalytic activity

[Protein]-S(8)-aminomethyldihydrolipoyllysine + tetrahydrofolate = [protein]-dihydrolipoyllysine + 5,10-methylenetetrahydrofolate + NH3. SAAS SAAS006223 RuleBase RU003981

Subunit structure

The glycine cleavage system is composed of four proteins: P, T, L and H By similarity. RuleBase RU003981

Sequence similarities

Belongs to the GcvT family. RuleBase RU003980

Ontologies

Keywords
   Molecular functionAminotransferase SAAS SAAS006223 RuleBase RU003981
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processglycine catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular functionaminomethyltransferase activity

Inferred from electronic annotation. Source: EC

transaminase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A1K4Z9 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: AFF6143036F740AE

FASTA33536,166
        10         20         30         40         50         60 
MPVNYGSQIE EHHAVRRHAG MFDVSHMLAL DLTGPDATAW LRRLLANDVA KLRTAGKALY 

        70         80         90        100        110        120 
ACMLNPTGGV IDDLIVYRLS DNQYRIVVNA GTADKDVQWM RRQIGEMPAN VTLTPRRDLA 

       130        140        150        160        170        180 
MIAVQGPHAR EASWKAFPEL RAGSESLPPF SGAQLGDYFV GRTGYTGEDG FEIAVPADKA 

       190        200        210        220        230        240 
EAAWAQLLAA GVQPCGLGAR DTLRLEAGMN LYGQDMDEST SPLDTGLGWT IDLKDEQRDF 

       250        260        270        280        290        300 
VGKTALLAAP ATRQVLGLVL EDKGVLRAHM AVFTPDGEGE TTSGTFSPTL QRAIAFARLP 

       310        320        330 
PGVAAGDTVE VDVRGKRLKA RCVKLPFVRN GKALV

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References

[1]"Complete genome of the mutualistic, N2-fixing grass endophyte Azoarcus sp. strain BH72."
Krause A., Ramakumar A., Bartels D., Battistoni F., Bekel T., Boch J., Boehm M., Friedrich F., Hurek T., Krause L., Linke B., McHardy A.C., Sarkar A., Schneiker S., Syed A.A., Thauer R., Vorhoelter F.-J., Weidner S. expand/collapse author list , Puehler A., Reinhold-Hurek B., Kaiser O., Goesmann A.
Nat. Biotechnol. 24:1385-1391(2006) [PubMed: 17057704] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM406670 Genomic DNA. Translation: CAL93904.1.
RefSeqYP_932791.2. NC_008702.1.

3D structure databases

ProteinModelPortalA1K4Z9.
SMRA1K4Z9. Positions 1-334.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1K4Z9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4608870.
GenomeReviewsGene locus azo1287 in contig AM406670_GR.
KEGGazo:azo1287.
PATRIC21010926. VBIAzoSp26047_1316.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0404.
HOGENOMHBG299834.
OMAHAREASW.
PhylomeDBA1K4Z9.
ProtClustDBPRK00389.

Family and domain databases

InterProIPR013977. GCV_T_C.
IPR006222. GCV_T_N.
IPR006223. GcvT.
[Graphical view]
KOK00605.
PANTHERPTHR13847:SF5. PTHR13847:SF5. 1 hit.
PfamPF01571. GCV_T. 1 hit.
PF08669. GCV_T_C. 1 hit.
[Graphical view]
PIRSFPIRSF006487. GcvT. 1 hit.
TIGRFAMsTIGR00528. GcvT. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1K4Z9_AZOSB
AccessionPrimary (citable) accession number: A1K4Z9
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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