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A1K3C8 (A1K3C8_AZOSB) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.-.-.- EMBL CAL93333.1
Gene names
Name:hrpA EMBL CAL93333.1
Ordered Locus Names:azo0716 EMBL CAL93333.1
OrganismAzoarcus sp. (strain BH72) [Complete proteome] [HAMAP] EMBL CAL93333.1
Taxonomic identifier62928 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeAzoarcus

Protein attributes

Sequence length1360 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A1K3C8 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 84C768E62F6C66D5

FASTA1,360151,539
        10         20         30         40         50         60 
MKQMQQAGRG AAIEHFDDCL SVDRPRLRRL ARDIGRQRGE RRDKLVADLA ALRERSRAAL 

        70         80         90        100        110        120 
AARRAALPVP SFPAELPVSA RRDEIAAALE AHQVIIVCGE TGSGKTTQLP KICLSLGRGA 

       130        140        150        160        170        180 
AGLIGHTQPR RLAARATASR IAQELNSELG RAVGYKIRFT DRLSADSHIK LMTDGILLAE 

       190        200        210        220        230        240 
TQTDPLLAAY DTIIIDEAHE RSLNIDFLLG YLKTLLPRRP DLKLIVTSAT LDADRFARHF 

       250        260        270        280        290        300 
ASADDKPAPV IEVSGRLYPI EMRYRPVEEA DEAPAGDKSG PRRQKGKELL DALVDAVDEA 

       310        320        330        340        350        360 
QSCGPGDVLV FLPGEREIRE AAEALRKAHH AAGTEILPLF ARQSAQEQAR VFASGKGRRV 

       370        380        390        400        410        420 
VLATNVAETS LTVPGIRYVV DTGQARVKRY SPRNKVEQLQ IENIAQSAAR QRAGRCGRVM 

       430        440        450        460        470        480 
DGICFRLYAE DDFNRRPAHT DPEILRSSLA GVILRMKALK LGAVEEFPFI DPPGGRLIAD 

       490        500        510        520        530        540 
GYQLLTELGA VSDDEQRELT PIGVELAKLP LDPKIGRMIL AARDRGCLKE LLVIAAALSV 

       550        560        570        580        590        600 
QDPRERPPES TGAADQAHAK FRGGEQDQRS EFLWYLRLWQ AWEEVQRHES GNQQKQWCKK 

       610        620        630        640        650        660 
HFLSWLRMRE WRDVYTQLHS LCAEHGWKEN ELPANYEAIH KALLAGLLGH IGCKTEEDQG 

       670        680        690        700        710        720 
AKGPQAGAYL GARGIKFWPH PGSALAKKAG KWIMGAELVD TSRLFARCLA RIEPEWVEEV 

       730        740        750        760        770        780 
GAHLLKRHVF EPHWSKTAGS VRAWERGTVH GLVLYGRRGV NYRDIDPALC RELFIREGLV 

       790        800        810        820        830        840 
AGEIAEGPAR AMAFLAHNRK LVAEIERLEH KSRRPDVLVD EALIEAFYDA KIPAEVVDLA 

       850        860        870        880        890        900 
GFEHWRKAAE KREPKLLYLS REQLMRHEAE GITTERFPTQ LEVLGQKLKL GYLHQPGEAD 

       910        920        930        940        950        960 
DGVTLTVPLA MLNQVPAARC EWLVPGLLEE KVTALLKTVP QKHRHRLQPM SESAAAFMEQ 

       970        980        990       1000       1010       1020 
FESGEFDTGE PLLKALQRFV EERVQLKLPL ESFRPENLNP HCFMNFRVID EHGRPLAQSR 

      1030       1040       1050       1060       1070       1080 
NLADLRARYR EQIAERFRGA RLSGAADATA SAAAAPAATS APQRKASTAA GGNDGATYAG 

      1090       1100       1110       1120       1130       1140 
HTAWTFPPLP ELLEVKVGGR DVIGFPALHD DGASVSLRPY DTQEEAAQVH RRGLARLFAL 

      1150       1160       1170       1180       1190       1200 
NLRDQVKAIE RLPGLRELAL QYLSFGTEAE LRQRLIDATL ARTCLLEPLP TDAAAFERRI 

      1210       1220       1230       1240       1250       1260 
AEAKPRITLV AQEFARLTGQ ILADYAVVQK RVSGLKTFPD VVADVQAQLA ALLPKDFLVA 

      1270       1280       1290       1300       1310       1320 
LPWERLAQLP RYLKAVAVRI DKLRNNTARD AQSMAEWKTL AAAYERERAA RSRAGVLDPV 

      1330       1340       1350       1360 
LEEFRWLLEE LRVGLFAQEL KTPMPVSVKR LQKIWEARPR 

« Hide

References

[1]"Complete genome of the mutualistic, N2-fixing grass endophyte Azoarcus sp. strain BH72."
Krause A., Ramakumar A., Bartels D., Battistoni F., Bekel T., Boch J., Boehm M., Friedrich F., Hurek T., Krause L., Linke B., McHardy A.C., Sarkar A., Schneiker S., Syed A.A., Thauer R., Vorhoelter F.-J., Weidner S. expand/collapse author list , Puehler A., Reinhold-Hurek B., Kaiser O., Goesmann A.
Nat. Biotechnol. 24:1385-1391(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BH72 EMBL CAL93333.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM406670 Genomic DNA. Translation: CAL93333.1.
RefSeqYP_932220.1. NC_008702.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING62928.azo0716.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAL93333; CAL93333; azo0716.
GeneID4606532.
KEGGazo:azo0716.
PATRIC21009708. VBIAzoSp26047_0729.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1643.
HOGENOMHOG000247272.
KOK03578.
OMARIFDGHT.
OrthoDBEOG6PP9H5.

Family and domain databases

Gene3D3.40.50.300. 2 hits.
InterProIPR003593. AAA+_ATPase.
IPR011709. DUF1605.
IPR007502. Helicase-assoc_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR024590. RNA_helic_ATP-dep_DEAH_HrpA_C.
IPR010222. RNA_helicase_ATP-dep_DEAH_HrpA.
[Graphical view]
PfamPF11898. DUF3418. 1 hit.
PF04408. HA2. 1 hit.
PF00271. Helicase_C. 1 hit.
PF07717. OB_NTP_bind. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
SM00487. DEXDc. 1 hit.
SM00847. HA2. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR01967. DEAH_box_HrpA. 1 hit.
PROSITEPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1K3C8_AZOSB
AccessionPrimary (citable) accession number: A1K3C8
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 14, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)