Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

A1K2K6

- A1K2K6_AZOSB

UniProt

A1K2K6 - A1K2K6_AZOSB

Protein
Submitted name:

DNA ligase

Gene

lig2

Organism
Azoarcus sp. (strain BH72)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Name:lig2Imported
    Ordered Locus Names:azo0444Imported
    OrganismiAzoarcus sp. (strain BH72)Imported
    Taxonomic identifieri62928 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeAzoarcus
    ProteomesiUP000002588: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi62928.azo0444.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiNRHKSGV.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A1K2K6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKAFAALYAE LDATTSSNAK LAAMVAYFRA APAADAAWAA YFLAGGKPRQ    50
    LVPVRQLREF AMRIAGVPEW LFEESYQAVG DLAETLALLL PEGVAGDDAP 100
    LAEWVEARLL PLRGLPPDVL QPRLEMLFGA LSTLQRFVCA KLITGSFRVG 150
    VSRLLVTRAL GEAGGVDTRR VAERLIGYTD IGARPDAASY RALLAPPAPA 200
    EGAREDGLPY PFFLAHPLQA PVEALEDRLG PPENWLIEWK WDGIRAQLVR 250
    RGGRSWLWSR GEDLVTERFP ELAALGAELP EGTVIDGEIL VWKAGRVQPF 300
    AALQKRLGRK TVGTRLLAEA PVVLCAYDLL EWQGEDLRAQ PQHARRAALE 350
    RLAQHHPQRA LQLSPLLHGE DWAALARLRE EARERGVEGM MLKGRDAPYG 400
    VGRSKEGGVW WKWKIDPYSI DAVLIYAQRG HGRRASLYTD YTFAVWDAPP 450
    DAPQRRLVPF AKAYSGLTDA EIRQVDAIVR KTTQEKFGPV RSVTPEQVFE 500
    LGFEGIARSA RHKSGIAVRF PRILRWRHDK PAAEADTLQT LAELLPP 547
    Length:547
    Mass (Da):60,601
    Last modified:February 6, 2007 - v1
    Checksum:i5BC3D20EEE765BA1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM406670 Genomic DNA. Translation: CAL93061.1.
    RefSeqiWP_011764179.1. NC_008702.1.
    YP_931948.1. NC_008702.1.

    Genome annotation databases

    EnsemblBacteriaiCAL93061; CAL93061; azo0444.
    GeneIDi4606402.
    KEGGiazo:azo0444.
    PATRICi21009140. VBIAzoSp26047_0446.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM406670 Genomic DNA. Translation: CAL93061.1 .
    RefSeqi WP_011764179.1. NC_008702.1.
    YP_931948.1. NC_008702.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 62928.azo0444.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAL93061 ; CAL93061 ; azo0444 .
    GeneIDi 4606402.
    KEGGi azo:azo0444.
    PATRICi 21009140. VBIAzoSp26047_0446.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi NRHKSGV.
    OrthoDBi EOG6Q8HXT.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BH72Imported.

    Entry informationi

    Entry nameiA1K2K6_AZOSB
    AccessioniPrimary (citable) accession number: A1K2K6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 6, 2007
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3