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A1K2K6 (A1K2K6_AZOSB) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL CAL93061.1
Gene names
Name:lig2 EMBL CAL93061.1
Ordered Locus Names:azo0444 EMBL CAL93061.1
OrganismAzoarcus sp. (strain BH72) [Complete proteome] [HAMAP] EMBL CAL93061.1
Taxonomic identifier62928 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeAzoarcus

Protein attributes

Sequence length547 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A1K2K6 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 5BC3D20EEE765BA1

FASTA54760,601
        10         20         30         40         50         60 
MKAFAALYAE LDATTSSNAK LAAMVAYFRA APAADAAWAA YFLAGGKPRQ LVPVRQLREF 

        70         80         90        100        110        120 
AMRIAGVPEW LFEESYQAVG DLAETLALLL PEGVAGDDAP LAEWVEARLL PLRGLPPDVL 

       130        140        150        160        170        180 
QPRLEMLFGA LSTLQRFVCA KLITGSFRVG VSRLLVTRAL GEAGGVDTRR VAERLIGYTD 

       190        200        210        220        230        240 
IGARPDAASY RALLAPPAPA EGAREDGLPY PFFLAHPLQA PVEALEDRLG PPENWLIEWK 

       250        260        270        280        290        300 
WDGIRAQLVR RGGRSWLWSR GEDLVTERFP ELAALGAELP EGTVIDGEIL VWKAGRVQPF 

       310        320        330        340        350        360 
AALQKRLGRK TVGTRLLAEA PVVLCAYDLL EWQGEDLRAQ PQHARRAALE RLAQHHPQRA 

       370        380        390        400        410        420 
LQLSPLLHGE DWAALARLRE EARERGVEGM MLKGRDAPYG VGRSKEGGVW WKWKIDPYSI 

       430        440        450        460        470        480 
DAVLIYAQRG HGRRASLYTD YTFAVWDAPP DAPQRRLVPF AKAYSGLTDA EIRQVDAIVR 

       490        500        510        520        530        540 
KTTQEKFGPV RSVTPEQVFE LGFEGIARSA RHKSGIAVRF PRILRWRHDK PAAEADTLQT 


LAELLPP 

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References

[1]"Complete genome of the mutualistic, N2-fixing grass endophyte Azoarcus sp. strain BH72."
Krause A., Ramakumar A., Bartels D., Battistoni F., Bekel T., Boch J., Boehm M., Friedrich F., Hurek T., Krause L., Linke B., McHardy A.C., Sarkar A., Schneiker S., Syed A.A., Thauer R., Vorhoelter F.-J., Weidner S. expand/collapse author list , Puehler A., Reinhold-Hurek B., Kaiser O., Goesmann A.
Nat. Biotechnol. 24:1385-1391(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BH72 EMBL CAL93061.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM406670 Genomic DNA. Translation: CAL93061.1.
RefSeqYP_931948.1. NC_008702.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING62928.azo0444.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAL93061; CAL93061; azo0444.
GeneID4606402.
KEGGazo:azo0444.
PATRIC21009140. VBIAzoSp26047_0446.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAGQPYPFF.
OrthoDBEOG6Q8HXT.
ProtClustDBPRK09247.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1K2K6_AZOSB
AccessionPrimary (citable) accession number: A1K2K6
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: November 13, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)