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Protein
Submitted name:

DNA ligase

Gene

lig2

Organism
Azoarcus sp. (strain BH72)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Name:lig2Imported
Ordered Locus Names:azo0444Imported
OrganismiAzoarcus sp. (strain BH72)Imported
Taxonomic identifieri62928 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeAzoarcus
ProteomesiUP000002588 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi62928.azo0444.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiAAWAVYF.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1K2K6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAFAALYAE LDATTSSNAK LAAMVAYFRA APAADAAWAA YFLAGGKPRQ
60 70 80 90 100
LVPVRQLREF AMRIAGVPEW LFEESYQAVG DLAETLALLL PEGVAGDDAP
110 120 130 140 150
LAEWVEARLL PLRGLPPDVL QPRLEMLFGA LSTLQRFVCA KLITGSFRVG
160 170 180 190 200
VSRLLVTRAL GEAGGVDTRR VAERLIGYTD IGARPDAASY RALLAPPAPA
210 220 230 240 250
EGAREDGLPY PFFLAHPLQA PVEALEDRLG PPENWLIEWK WDGIRAQLVR
260 270 280 290 300
RGGRSWLWSR GEDLVTERFP ELAALGAELP EGTVIDGEIL VWKAGRVQPF
310 320 330 340 350
AALQKRLGRK TVGTRLLAEA PVVLCAYDLL EWQGEDLRAQ PQHARRAALE
360 370 380 390 400
RLAQHHPQRA LQLSPLLHGE DWAALARLRE EARERGVEGM MLKGRDAPYG
410 420 430 440 450
VGRSKEGGVW WKWKIDPYSI DAVLIYAQRG HGRRASLYTD YTFAVWDAPP
460 470 480 490 500
DAPQRRLVPF AKAYSGLTDA EIRQVDAIVR KTTQEKFGPV RSVTPEQVFE
510 520 530 540
LGFEGIARSA RHKSGIAVRF PRILRWRHDK PAAEADTLQT LAELLPP
Length:547
Mass (Da):60,601
Last modified:February 6, 2007 - v1
Checksum:i5BC3D20EEE765BA1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM406670 Genomic DNA. Translation: CAL93061.1.
RefSeqiWP_011764179.1. NC_008702.1.

Genome annotation databases

EnsemblBacteriaiCAL93061; CAL93061; azo0444.
KEGGiazo:azo0444.
PATRICi21009140. VBIAzoSp26047_0446.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM406670 Genomic DNA. Translation: CAL93061.1.
RefSeqiWP_011764179.1. NC_008702.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi62928.azo0444.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAL93061; CAL93061; azo0444.
KEGGiazo:azo0444.
PATRICi21009140. VBIAzoSp26047_0446.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiAAWAVYF.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BH72Imported.

Entry informationi

Entry nameiA1K2K6_AZOSB
AccessioniPrimary (citable) accession number: A1K2K6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: July 22, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.