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Protein
Submitted name:

Putative type III secretion protein

Gene

yscC

Organism
Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative type III secretion proteinImported
Gene namesi
Name:yscCImported
Ordered Locus Names:YEP0038Imported
Encoded oniPlasmid pYVe8081Imported
OrganismiYersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)Imported
Taxonomic identifieri393305 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesYersiniaceaeYersinia
Proteomesi
  • UP000000642 Componenti: Plasmid pYVe8081

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_500263527127 – 607Sequence analysisAdd BLAST581

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini112 – 171Secretin_NInterPro annotationAdd BLAST60
Domaini185 – 280Secretin_NInterPro annotationAdd BLAST96

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

HOGENOMiHOG000219614.
KOiK03219.
OMAiYLMARIS.
OrthoDBiPOG091H00DF.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 2 hits.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1JU94-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFPLHSFFK RVLTGTLLLL SSYSWAQELD WLPIPYVYVA KGESLRDLLT
60 70 80 90 100
DFGANYDATV VVSDKINDKV SGQFEHDNPQ DFLQHIASLY NLVWYYDGNV
110 120 130 140 150
LYIFKNSEVA SRLIRLQESE AAELKQALQR SGIWEPRFGW RPDASNRLVY
160 170 180 190 200
VSGPPRYLEL VEQTAAALEQ QTQIRSEKTG ALAIEIFPLK YASASDRTIH
210 220 230 240 250
YRDDEVAAPG VATILQRVLS DATIQQVTVD NQRIPQVATR ASAQARVEAD
260 270 280 290 300
PSLNAIIVRD SPERMPMYQR LIHALDKPSA RIEVALSIVD INADQLTELG
310 320 330 340 350
VDWRVGIRTG NNHQVVIKTT GDQSNIASNG ALGSLIDARG LDYLLARVNL
360 370 380 390 400
LENEGSAQVV SRPTLLTQEN AQAVIDHSET YYVKVTGKEV AELKGITYGT
410 420 430 440 450
MLRMTPRVLT QGDKSEISLN LHIEDGNQKP NSSGIEGIPT ISRTVVDTVA
460 470 480 490 500
RVGHGQSLII GGIYRDELSV ALSKVPLLGD IPYLGALFRR KSELTRRTVR
510 520 530 540 550
LFIIEPRIID EGIAHHLALG NGQDLRTGIL AVDEISNQST TLNKLLGGSQ
560 570 580 590 600
CQPLNKAQEV QKWLSQNNKS SYLTQCKMDK SLGWRVVEGA CTPAESWCVS

APKRGVL
Length:607
Mass (Da):67,222
Last modified:February 6, 2007 - v1
Checksum:i3F98FBA638F1777E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM286416 Genomic DNA. Translation: CAL10060.1.
RefSeqiWP_011100762.1. NC_008791.1.
YP_001004090.1. NC_008791.1.

Genome annotation databases

EnsemblBacteriaiCAL10060; CAL10060; YEP0038.
GeneIDi4711865.
KEGGiyen:YEP0038.
PATRICi18559228. VBIYerEnt11519_0039.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM286416 Genomic DNA. Translation: CAL10060.1.
RefSeqiWP_011100762.1. NC_008791.1.
YP_001004090.1. NC_008791.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAL10060; CAL10060; YEP0038.
GeneIDi4711865.
KEGGiyen:YEP0038.
PATRICi18559228. VBIYerEnt11519_0039.

Phylogenomic databases

HOGENOMiHOG000219614.
KOiK03219.
OMAiYLMARIS.
OrthoDBiPOG091H00DF.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 2 hits.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA1JU94_YERE8
AccessioniPrimary (citable) accession number: A1JU94
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: November 2, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.