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A1JSJ0

- GLGB_YERE8

UniProt

A1JSJ0 - GLGB_YERE8

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei405 – 4051NucleophileUniRule annotation
Active sitei458 – 4581Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:YE4013
OrganismiYersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Taxonomic identifieri393305 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000000642: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7277271,4-alpha-glucan branching enzyme GlgBPRO_1000045006Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi393305.YE4013.

Structurei

3D structure databases

ProteinModelPortaliA1JSJ0.
SMRiA1JSJ0. Positions 117-725.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiGELSHAW.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

A1JSJ0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSVLPDRQVI NQIISGHYAD PFSVLGMHQT ERGLQVCALL PDAQEVWLID
60 70 80 90 100
TKTGRRVAQL DCEDPRGFFA VQLTRRKNPF RYQFAVTWQE STQIIEDPYR
110 120 130 140 150
FGTLLQDIDT WLLAEGTHLR PYERLGAHLM SLDEVPGVSF AVWAPNAQRV
160 170 180 190 200
SVVGEFNFWD GRRHPMRLRR ENGIWELFLP GVQAGQLYKF EIIDCHGQVR
210 220 230 240 250
LKADPYAFKA QMRPETASLI SPLPDVVENT PARQKANDLR SPISIYEVHL
260 270 280 290 300
GSWRRHTDNN FWLSYGELAD QLVEYVKYMG FTHVELLPIN EHPFDGSWGY
310 320 330 340 350
QPLGLYAPTR RFGTPQDFKD FVAKFHEAGI NVILDWVPGH FPSDEHGLST
360 370 380 390 400
FDGTALYEYA DPREGYHQDW NTLIYNYGRN EVRNYLAGNA FYWMERFGID
410 420 430 440 450
ALRIDAVASM IYRDYSRAEG QWVPNYYGGR ENLEAIAFLR YTNHTIGVER
460 470 480 490 500
PGGVTMAEES TDFPGVTLPP DAGGLGFNYK WNMGWMHDTL NYMQCDPVHR
510 520 530 540 550
KYHHNLMTFG MLYAYTENFI LPISHDEVVH GKRSVLDRMP GDAWQKFANL
560 570 580 590 600
RAYYGFMWAH PGKKLLFMGC EFAQGREWNF DTSLDWHLLD DENGWHKGVQ
610 620 630 640 650
RWVRDLNHCY QQYAPLYELD YQPAGFEWLV VDDHENSVFA FLRRDADGNE
660 670 680 690 700
LIVISNFTPV PRYNYRVGVP QSGHYREVLN SDSAFYRGSN MGNQGGIHSH
710 720
PVSSHNHAHS LLLTLPPLST IYLTRGG
Length:727
Mass (Da):83,951
Last modified:February 6, 2007 - v1
Checksum:iC7B3DDA329DEAF7E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM286415 Genomic DNA. Translation: CAL14031.1.
RefSeqiYP_001008157.1. NC_008800.1.

Genome annotation databases

EnsemblBacteriaiCAL14031; CAL14031; YE4013.
GeneIDi4716273.
KEGGiyen:YE4013.
PATRICi18567894. VBIYerEnt11519_4272.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM286415 Genomic DNA. Translation: CAL14031.1 .
RefSeqi YP_001008157.1. NC_008800.1.

3D structure databases

ProteinModelPortali A1JSJ0.
SMRi A1JSJ0. Positions 117-725.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 393305.YE4013.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAL14031 ; CAL14031 ; YE4013 .
GeneIDi 4716273.
KEGGi yen:YE4013.
PATRICi 18567894. VBIYerEnt11519_4272.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi GELSHAW.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NCTC 13174 / 8081.

Entry informationi

Entry nameiGLGB_YERE8
AccessioniPrimary (citable) accession number: A1JSJ0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: February 6, 2007
Last modified: October 1, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3