A1JR00 (A1JR00_YERE8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL CAL13720.1
EC=4.1.1.15 EMBL CAL13720.1

Gene names

Name:	gadA EMBL CAL13720.1
Ordered Locus Names:	YE3693 EMBL CAL13720.1

Organism

Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) [Complete proteome] [HAMAP] EMBL CAL13720.1

Taxonomic identifier

393305 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia › Yersinia enterocolitica › Yersinia enterocolitica subsp. enterocolitica

Protein attributes

Sequence length	466 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL CAL13720.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1JR00 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: E9AD51E2773B30B6	FASTA	466	52,486
	10 20 30 40 50 60 MTRKSLDDYR SDLLDSRFGS KAIRNISENK VFPKEEMRED IAFQIISDEL FLDGNARQNL 70 80 90 100 110 120 ATFCQTWDDD NVHKLMDLSI NKNWIDKEEY PQSAAIDMRC VNMMADLWNA PTPKGAQGVG 130 140 150 160 170 180 TNTIGSSEAC MLGGMAMKWR WRKKMEAAGK PTNKPNFVCG PVQVCWHKFA RYWEVEIREI 190 200 210 220 230 240 PMIPGQLFMD PQRMIEACDE NTIGVVPTFG VTYTGNYELP KPLHDALDKL QKDTGLDIDM 250 260 270 280 290 300 HIDAASGGFL APFVAPDIEW DFRLPRVKSI STSGHKFGLA PLGCGWVIWR DAAALPEELI 310 320 330 340 350 360 FNVDYLGGQV GTFAINFSRP TGQVISQYYE FIRLGREGYT KVQSACYQVA EFLAKEIAPL 370 380 390 400 410 420 GPYEFYCSGG PYEGIPAICF RIKKGAKAGY TLYDLSERLR LRGWQVPAFT LSGKMSDVVV 430 440 450 460 MRIMCRRGFE MDFAGLLLDD FKSSLKYLSE HPSLGGEASQ NSFSHT

References

[1]

"The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081." Thomson N.R., Howard S., Wren B.W., Holden M.T.G., Crossman L., Challis G.L., Churcher C., Mungall K., Brooks K., Chillingworth T., Feltwell T., Abdellah Z., Hauser H., Jagels K., Maddison M., Moule S., Sanders M., Whitehead S. , Quail M.A., Dougan G., Parkhill J., Prentice M.B. PLoS Genet. 2:e206-e206(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 8081 EMBL CAL13720.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM286415 Genomic DNA. Translation: CAL13720.1.
RefSeq	YP_001007848.1. NC_008800.1.
3D structure databases
ProteinModelPortal	A1JR00.
SMR	A1JR00. Positions 4-466.
ModBase	Search...
Protein-protein interaction databases
STRING	393305.YE3693.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4714092.
KEGG	yen:YE3693.
PATRIC	18567201. VBIYerEnt11519_3933.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000070228.
KO	K01580.
OMA	IELREVP.
ProtClustDB	CLSK880040.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR021115. Pyridoxal-P_BS. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
PROSITE	PS00392. DDC_GAD_HDC_YDC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1JR00_YERE8

Accession

Primary (citable) accession number: A1JR00

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)