Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A1JR00 (A1JR00_YERE8) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length466 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
A1JR00 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: E9AD51E2773B30B6

FASTA46652,486
        10         20         30         40         50         60 
MTRKSLDDYR SDLLDSRFGS KAIRNISENK VFPKEEMRED IAFQIISDEL FLDGNARQNL 

        70         80         90        100        110        120 
ATFCQTWDDD NVHKLMDLSI NKNWIDKEEY PQSAAIDMRC VNMMADLWNA PTPKGAQGVG 

       130        140        150        160        170        180 
TNTIGSSEAC MLGGMAMKWR WRKKMEAAGK PTNKPNFVCG PVQVCWHKFA RYWEVEIREI 

       190        200        210        220        230        240 
PMIPGQLFMD PQRMIEACDE NTIGVVPTFG VTYTGNYELP KPLHDALDKL QKDTGLDIDM 

       250        260        270        280        290        300 
HIDAASGGFL APFVAPDIEW DFRLPRVKSI STSGHKFGLA PLGCGWVIWR DAAALPEELI 

       310        320        330        340        350        360 
FNVDYLGGQV GTFAINFSRP TGQVISQYYE FIRLGREGYT KVQSACYQVA EFLAKEIAPL 

       370        380        390        400        410        420 
GPYEFYCSGG PYEGIPAICF RIKKGAKAGY TLYDLSERLR LRGWQVPAFT LSGKMSDVVV 

       430        440        450        460 
MRIMCRRGFE MDFAGLLLDD FKSSLKYLSE HPSLGGEASQ NSFSHT 

« Hide

References

[1]"The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081."
Thomson N.R., Howard S., Wren B.W., Holden M.T.G., Crossman L., Challis G.L., Churcher C., Mungall K., Brooks K., Chillingworth T., Feltwell T., Abdellah Z., Hauser H., Jagels K., Maddison M., Moule S., Sanders M., Whitehead S. expand/collapse author list , Quail M.A., Dougan G., Parkhill J., Prentice M.B.
PLoS Genet. 2:2039-2051(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NCTC 13174 / 8081.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM286415 Genomic DNA. Translation: CAL13720.1.
RefSeqYP_001007848.1. NC_008800.1.

3D structure databases

ProteinModelPortalA1JR00.
SMRA1JR00. Positions 4-466.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING393305.YE3693.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAL13720; CAL13720; YE3693.
GeneID4714092.
KEGGyen:YE3693.
PATRIC18567201. VBIYerEnt11519_3933.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OMAPNLVMSS.
OrthoDBEOG6TFCPW.
ProtClustDBCLSK880040.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1JR00_YERE8
AccessionPrimary (citable) accession number: A1JR00
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: November 13, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)