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Protein

Superoxide dismutase

Gene

sodB

Organism
Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi27Divalent metal cationUniRule annotation1
Metal bindingi74Divalent metal cationUniRule annotation1
Metal bindingi157Divalent metal cationUniRule annotation1
Metal bindingi161Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
Ordered Locus Names:YE2157Imported
OrganismiYersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)Imported
Taxonomic identifieri393305 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesYersiniaceaeYersinia
Proteomesi
  • UP000000642 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi393305.YE2157

Structurei

3D structure databases

ProteinModelPortaliA1JP47
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 82Sod_Fe_NInterPro annotationAdd BLAST81
Domaini89 – 189Sod_Fe_CInterPro annotationAdd BLAST101

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4 Bacteria
COG0605 LUCA
HOGENOMiHOG000013584
KOiK04564
OMAiKWGSFDK
OrthoDBiPOG091H03Q7

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

A1JP47-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFELPALPY AQNALEPHIS AETLEYHYGK HHNTYVVNLN NLIKDTEFAG
60 70 80 90 100
KSLEEIVKTS SGGIFNNAAQ VWNHTFYWHC LSPNGGGEPT GKVADAINQS
110 120 130 140 150
FGSFAEFKAQ FTDAAVKNFG AGWTWLVKKT DGTLAIVSTS NAATPLTTAD
160 170 180 190
KPLLTVDVWE HAYYIDYRNA RPKYLENFWA LVNWSFVEKN LA
Length:192
Mass (Da):21,439
Last modified:February 6, 2007 - v1
Checksum:i5B2F7A6D53CC6FC2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM286415 Genomic DNA Translation: CAL12227.1
RefSeqiWP_005169447.1, NC_008800.1
YP_001006397.1, NC_008800.1

Genome annotation databases

EnsemblBacteriaiCAL12227; CAL12227; YE2157
GeneIDi4713476
KEGGiyen:YE2157
PATRICifig|393305.7.peg.2322

Similar proteinsi

Entry informationi

Entry nameiA1JP47_YERE8
AccessioniPrimary (citable) accession number: A1JP47
Entry historyiIntegrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: March 28, 2018
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health