A1JMF0 (A1JMF0_YERE8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Exopolygalacturonate lyase EMBL CAL11965.1

Gene names

Name:	kdgC EMBL CAL11965.1
Ordered Locus Names:	YE1886

Organism

Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) [Complete proteome] [HAMAP]

Taxonomic identifier

393305 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia

Protein attributes

Sequence length	555 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL CAL11965.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pectin catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	carbon-oxygen lyase activity, acting on polysaccharides Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1JMF0 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: D88B70DE5BB13B25	FASTA	555	63,810
	10 20 30 40 50 60 MDFIGNIKGS DAVMINWLSA IRSYVDLVQS VSHSNQNPTP LMADGFDVLT HQPVVWKFPD 70 80 90 100 110 120 GRHVPISNFA SQQNWLRTLD ALSLVTQDPQ YHQQARVQSS YFMQHGVHEQ SGLFYWGGHR 130 140 150 160 170 180 FFNLDTLKTE GPESKAQVHE LKHHLPYYDL LLSVDREKTL NFLQGFWHAH VEDWQTLDLG 190 200 210 220 230 240 RHGSYDKQRD PHVFTHARHD VVKPEALPQL PETKGLTFVN AGTDLIYAAY KYAEYTGDIA 250 260 270 280 290 300 AAAWGKHLYR QYVLARNPET GLPVYQFSSP QQRRPIPEDD NQTQSWYGDR AKRQFGPEFG 310 320 330 340 350 360 EIAREANVLF RDMRPLLIDN PLAMLDILRQ QPDAEVLQWV IDGLKNYYRF AYDVESNTLR 370 380 390 400 410 420 PLWNDGQDMS GYVLQRDGYY GAKGKVISPF PLEVDYLLPL VRAWRASEDD ELLDLIAVLV 430 440 450 460 470 480 HRWQLAELNK QQRSAALMDG KKPAASPYLL LALVELAEHC QCSQLFALAW QIGNDLFKQH 490 500 510 520 530 540 YHRGLFVESA EHRYFRIDNP LALALLTLIA AKQNKLAAIP QFITNGGYIH GDYRVNGESR 550 TLYDIDFIYP TLLNQ

References

[1]

"The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081." Thomson N.R., Howard S., Wren B.W., Holden M.T.G., Crossman L., Challis G.L., Churcher C., Mungall K., Brooks K., Chillingworth T., Feltwell T., Abdellah Z., Hauser H., Jagels K., Maddison M., Moule S., Sanders M., Whitehead S. , Quail M.A., Dougan G., Parkhill J., Prentice M.B. PLoS Genet. 2:2039-2051(2006) [PubMed: 17173484] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM286415 Genomic DNA. Translation: CAL11965.1.
RefSeq	YP_001006147.1. NC_008800.1.
3D structure databases
ProteinModelPortal	A1JMF0.
ModBase	Search...
Protein-protein interaction databases
STRING	A1JMF0.
Protein family/group databases
CAZy	PL2. Polysaccharide Lyase Family 2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4715998.
GenomeReviews	Gene locus YE1886 in contig AM286415_GR.
KEGG	yen:YE1886.
NMPDR	fig|630.2.peg.1837.
PATRIC	18563350. VBIYerEnt11519_2039.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG41513.
HOGENOM	HBG472751.
OMA	HRFINLD.
ProtClustDB	CLSK888942.
Enzyme and pathway databases
BioCyc	YENT393305:YE1886-MONOMER.
Family and domain databases
InterPro	IPR010702. Pectate_lyase_2. [Graphical view]
KO	K01731.
Pfam	PF06917. Pectate_lyase_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1JMF0_YERE8

Accession

Primary (citable) accession number: A1JMF0

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)