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A1JIZ0 (A1JIZ0_YERE8) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL CAL10581.1
Gene names
Ordered Locus Names:YE0458
OrganismYersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) [Complete proteome] [HAMAP]
Taxonomic identifier393305 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia

Protein attributes

Sequence length674 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processalginic acid catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentperiplasmic space

Inferred from electronic annotation. Source: InterPro

   Molecular functionpoly(beta-D-mannuronate) lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A1JIZ0 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: AD4F433F94D9273A

FASTA67477,063
        10         20         30         40         50         60 
MKQFTDRQMA KIRQRVMQQQ GNSVQQSEII ATLIEDNQVV LGSDTLVPAT GIATWNHYYY 

        70         80         90        100        110        120 
CPDHGVKLVW DRYSPTQHRC PIDSHLFNGE PYDGAWWRAL NGLNAKACNQ LGLLWQLTGE 

       130        140        150        160        170        180 
IRYFEKVRDI LIDYARYYPD YEVHGGIPYN GPGKANAQTL CEANCLLDFA LGYDFIAEAL 

       190        200        210        220        230        240 
SQEQRDCIAG RLLREGAEFL MQHRTRQLHN HEVKISSAIA VIGLILAEEL YVEFAVNAEY 

       250        260        270        280        290        300 
GLRYQLEHGL FNEGFWFEGS VHYHFYALQG FWSFEKLAAG SRYSLLALPY YRDMLSFPLK 

       310        320        330        340        350        360 
LLMPDGTFPR INDCTAGQEQ LNHAHLYEFA FKTYGNDEYA AALHHIYRQE PRLNLDALLY 

       370        380        390        400        410        420 
GVEELPPPMI DVIPTDTLHA PDCGLTILRQ PQSGRALLVK HSPYGGEHDH YDRLNLILFE 

       430        440        450        460        470        480 
QGQEVLPDLG TTGYGAQLHY GYYKNSATHN TLSINQKNQP PAVPVIHHWY QSANFSWLDT 

       490        500        510        520        530        540 
EVDWSQKAPM LDSHTRVQWD SEAYRDVKFR RRILWLEDAI IDISSIVNPH QQQWDWTLHI 

       550        560        570        580        590        600 
DGSVIESIGE STTFCASGPM QYLHQVTAQP LNGVIQCHYQ TAARPLTLWL AADATLFQGL 

       610        620        630        640        650        660 
APANPSVRDI SYLILRHHQP ESRVTCVFDM NNHDPLLKVQ VDNDGDILSI KLTRQQQVIQ 

       670 
VKIPFTASDL PLFS

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References

[1]"The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081."
Thomson N.R., Howard S., Wren B.W., Holden M.T.G., Crossman L., Challis G.L., Churcher C., Mungall K., Brooks K., Chillingworth T., Feltwell T., Abdellah Z., Hauser H., Jagels K., Maddison M., Moule S., Sanders M., Whitehead S. expand/collapse author list , Quail M.A., Dougan G., Parkhill J., Prentice M.B.
PLoS Genet. 2:2039-2051(2006) [PubMed: 17173484] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM286415 Genomic DNA. Translation: CAL10581.1.
RefSeqYP_001004825.1. NC_008800.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGA1JIZ0.

Protein family/group databases

CAZyPL17. Polysaccharide Lyase Family 17.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4715832.
GenomeReviewsGene locus YE0458 in contig AM286415_GR.
KEGGyen:YE0458.
NMPDRfig|630.2.peg.447.
PATRIC18560320. VBIYerEnt11519_0551.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG45022.
HOGENOMHBG757299.
OMAATESNAY.
ProtClustDBCLSK889500.

Enzyme and pathway databases

BioCycYENT393305:YE0458-MONOMER.

Family and domain databases

InterProIPR008397. Alginate_lyase_dom.
IPR008929. Chondroitin_lyas.
IPR012480. Hepar_II_III.
[Graphical view]
Gene3DG3DSA:1.50.10.110. Alginate_lyase. 1 hit.
PfamPF05426. Alginate_lyase. 1 hit.
PF07940. Hepar_II_III. 1 hit.
[Graphical view]
SUPFAMSSF48230. Chondroitin_lyas. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1JIZ0_YERE8
AccessionPrimary (citable) accession number: A1JIZ0
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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