Skip Header

Contribute Send feedback
Read comments (?) or add your own

A1JIM8 (TDCC_YERE8) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Threonine/serine transporter TdcC
Alternative name(s):
H(+)/threonine-serine symporter
Gene names
Name:tdcC
Ordered Locus Names:YE0337
OrganismYersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) [Complete proteome] [HAMAP]
Taxonomic identifier393305 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia ›

Protein attributes

Sequence length442 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in the import of threonine and serine into the cell, with the concomitant import of a proton (symport system) By similarity. HAMAP-Rule MF_01583

Subcellular location

Cell inner membrane; Multi-pass membrane protein By similarity HAMAP-Rule MF_01583.

Sequence similarities

Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 442442Threonine/serine transporter TdcC HAMAP-Rule MF_01583
PRO_0000309176

Regions

Transmembrane21 – 4121Helical; Potential
Transmembrane44 – 6421Helical; Potential
Transmembrane96 – 11621Helical; Potential
Transmembrane139 – 15921Helical; Potential
Transmembrane162 – 18221Helical; Potential
Transmembrane206 – 22621Helical; Potential
Transmembrane258 – 27821Helical; Potential
Transmembrane312 – 33221Helical; Potential
Transmembrane364 – 38421Helical; Potential
Transmembrane388 – 40821Helical; Potential
Transmembrane422 – 44221Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
A1JIM8 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: DFBFC6AF532A7EF1

FASTA44248,950
        10         20         30         40         50         60 
MHIDNAITTT IETKTWRKSD TTWTLGLFGT AIGAGVLFFP IRAGFGGLIP ILIMLVLAYP 

        70         80         90        100        110        120 
IAFLCHRALA RLCLSGSNCS GNITETVEEH FGKTGGVVIT FLYFFAICPL LWIYGVTITN 

       130        140        150        160        170        180 
TFMTFWENQL QLAPLNRGVV ALALLLLMAV VIYFGKDLMV KVMSFLVFPF IACLVLISLS 

       190        200        210        220        230        240 
LIPYWNASVI EQVDLSQISL LGHDGILVTV WLGISIMVFS FNFSPIVSSF VVSKREEYEP 

       250        260        270        280        290        300 
EFGREYTEKK CSQIISRASI LMVAVVMFFA FSCLFTLSPQ NMAEAKAQNI PVLSYLANHF 

       310        320        330        340        350        360 
SSMAGSRSTF SITLEYAASL IALVAIFKSF FGHYLGTLEG LNGLVIKFGY KGDKTKISSG 

       370        380        390        400        410        420 
KLNLISMFFI MGSTWLVAYI NPNILDLIEA MGAPIIASLL CLLPMYAIHK LPSLARFRGR 

       430        440 
PENYFVTIVG LLTIFNIVYK LL

« Hide

References

[1]"The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081."
Thomson N.R., Howard S., Wren B.W., Holden M.T.G., Crossman L., Challis G.L., Churcher C., Mungall K., Brooks K., Chillingworth T., Feltwell T., Abdellah Z., Hauser H., Jagels K., Maddison M., Moule S., Sanders M., Whitehead S. expand/collapse author list , Quail M.A., Dougan G., Parkhill J., Prentice M.B.
PLoS Genet. 2:2039-2051(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 8081.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM286415 Genomic DNA. Translation: CAL10467.1.
RefSeqYP_001004715.1. NC_008800.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING393305.YE0337.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4714347.
KEGGyen:YE0337.
PATRIC18560070. VBIYerEnt11519_0432.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0814.
HOGENOMHOG000270787.
KOK03838.
OMAWENQLQL.
ProtClustDBPRK13629.

Family and domain databases

HAMAPMF_01583. Thr_Ser_transp_TdcC.
InterProIPR013057. AA_transpt_TM.
IPR004694. Hydroxy_aa_transpt.
IPR023726. Thr/Ser_transpt_TdcC.
[Graphical view]
PfamPF01490. Aa_trans. 1 hit.
[Graphical view]
TIGRFAMsTIGR00814. stp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameTDCC_YERE8
AccessionPrimary (citable) accession number: A1JIM8
Entry history
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: February 6, 2007
Last modified: May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents