Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Threonine/serine transporter TdcC

Gene

tdcC

Organism
Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the import of threonine and serine into the cell, with the concomitant import of a proton (symport system).UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

Amino-acid transport, Symport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Threonine/serine transporter TdcCUniRule annotation
Alternative name(s):
H(+)/threonine-serine symporterUniRule annotation
Gene namesi
Name:tdcCUniRule annotation
Ordered Locus Names:YE0337
OrganismiYersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Taxonomic identifieri393305 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000000642 Componenti: Chromosome

Subcellular locationi

  • Cell inner membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei21 – 4121HelicalUniRule annotationAdd
BLAST
Transmembranei44 – 6421HelicalUniRule annotationAdd
BLAST
Transmembranei96 – 11621HelicalUniRule annotationAdd
BLAST
Transmembranei139 – 15921HelicalUniRule annotationAdd
BLAST
Transmembranei162 – 18221HelicalUniRule annotationAdd
BLAST
Transmembranei206 – 22621HelicalUniRule annotationAdd
BLAST
Transmembranei258 – 27821HelicalUniRule annotationAdd
BLAST
Transmembranei312 – 33221HelicalUniRule annotationAdd
BLAST
Transmembranei364 – 38421HelicalUniRule annotationAdd
BLAST
Transmembranei388 – 40821HelicalUniRule annotationAdd
BLAST
Transmembranei422 – 44221HelicalUniRule annotationAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 442442Threonine/serine transporter TdcCPRO_0000309176Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi393305.YE0337.

Family & Domainsi

Sequence similaritiesi

Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG0814.
HOGENOMiHOG000270787.
KOiK03838.
OMAiANHFSSM.
OrthoDBiEOG6X10TH.

Family and domain databases

HAMAPiMF_01583. Thr_Ser_transp_TdcC.
InterProiIPR013057. AA_transpt_TM.
IPR004694. Hydroxy_aa_transpt.
IPR023726. Thr/Ser_transpt_TdcC.
[Graphical view]
PfamiPF01490. Aa_trans. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00814. stp. 1 hit.

Sequencei

Sequence statusi: Complete.

A1JIM8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHIDNAITTT IETKTWRKSD TTWTLGLFGT AIGAGVLFFP IRAGFGGLIP
60 70 80 90 100
ILIMLVLAYP IAFLCHRALA RLCLSGSNCS GNITETVEEH FGKTGGVVIT
110 120 130 140 150
FLYFFAICPL LWIYGVTITN TFMTFWENQL QLAPLNRGVV ALALLLLMAV
160 170 180 190 200
VIYFGKDLMV KVMSFLVFPF IACLVLISLS LIPYWNASVI EQVDLSQISL
210 220 230 240 250
LGHDGILVTV WLGISIMVFS FNFSPIVSSF VVSKREEYEP EFGREYTEKK
260 270 280 290 300
CSQIISRASI LMVAVVMFFA FSCLFTLSPQ NMAEAKAQNI PVLSYLANHF
310 320 330 340 350
SSMAGSRSTF SITLEYAASL IALVAIFKSF FGHYLGTLEG LNGLVIKFGY
360 370 380 390 400
KGDKTKISSG KLNLISMFFI MGSTWLVAYI NPNILDLIEA MGAPIIASLL
410 420 430 440
CLLPMYAIHK LPSLARFRGR PENYFVTIVG LLTIFNIVYK LL
Length:442
Mass (Da):48,950
Last modified:February 6, 2007 - v1
Checksum:iDFBFC6AF532A7EF1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM286415 Genomic DNA. Translation: CAL10467.1.
RefSeqiWP_005175589.1. NC_008800.1.
YP_001004715.1. NC_008800.1.

Genome annotation databases

EnsemblBacteriaiCAL10467; CAL10467; YE0337.
GeneIDi4714347.
KEGGiyen:YE0337.
PATRICi18560070. VBIYerEnt11519_0432.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM286415 Genomic DNA. Translation: CAL10467.1.
RefSeqiWP_005175589.1. NC_008800.1.
YP_001004715.1. NC_008800.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi393305.YE0337.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAL10467; CAL10467; YE0337.
GeneIDi4714347.
KEGGiyen:YE0337.
PATRICi18560070. VBIYerEnt11519_0432.

Phylogenomic databases

eggNOGiCOG0814.
HOGENOMiHOG000270787.
KOiK03838.
OMAiANHFSSM.
OrthoDBiEOG6X10TH.

Family and domain databases

HAMAPiMF_01583. Thr_Ser_transp_TdcC.
InterProiIPR013057. AA_transpt_TM.
IPR004694. Hydroxy_aa_transpt.
IPR023726. Thr/Ser_transpt_TdcC.
[Graphical view]
PfamiPF01490. Aa_trans. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00814. stp. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NCTC 13174 / 8081.

Entry informationi

Entry nameiTDCC_YERE8
AccessioniPrimary (citable) accession number: A1JIM8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: February 6, 2007
Last modified: July 22, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.