Unreviewed,
UniProtKB/TrEMBL A1EA77 (A1EA77_RAT)
Last modified
January 19, 2010.
Version 18.
History...
Clusters with 100%,
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Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Voltage-dependent calcium channel T type alpha 1G subunit domain II EMBL ABL63740.1 | ||
| Gene names |
| ||
| Organism | Rattus norvegicus (Rat) EMBL ABL63740.1 | ||
| Taxonomic identifier | 10116 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus |
Protein attributes
| Sequence length | 285 AA. |
| Sequence status | Fragment. |
| Protein existence | Evidence at transcript level. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Ion transport Transport |
| Cellular component | Membrane |
| Domain | Transmembrane RuleBase RU003378V0 |
| Molecular function | Ionic channel RuleBase RU003378V0 |
| Gene Ontology (GO) | |
| Biological process | artery smooth muscle contraction Inferred from mutant phenotype. Source: RGD calcium ion transportInferred from electronic annotation. Source: InterPro elevation of cytosolic calcium ion concentrationInferred from mutant phenotype. Source: RGD transmembrane transportInferred from electronic annotation. Source: InterPro |
| Cellular component | cell soma Inferred from direct assay. Source: RGD dendriteInferred from direct assay. Source: RGD integral to membraneInferred from electronic annotation. Source: UniProtKB-KW perinuclear region of cytoplasmInferred from direct assay. Source: RGD plasma membraneInferred from direct assay. Source: RGD |
| Molecular function | low voltage-gated calcium channel activity Inferred from direct assay. Source: RGD |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||
Experimental info | ||||||||
|---|---|---|---|---|---|---|---|---|
| Non-terminal residue | 1 | 1 | EMBL ABL63740.1 | |||||
| Non-terminal residue | 285 | 1 | EMBL ABL63740.1 | |||||
Sequences
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References
| [1] | "High-voltage activated nifedipine-insensitive calcium channels control tone of rat basilar artery." Navarro-Gonzalez M.F., Grayson T.H., Hill C.E. Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: W EMBL ABL63740.1. Tissue: Basilar artery EMBL ABL63740.1. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | EF116285 mRNA. Translation: ABL63740.1. |
| IPI | IPI00777235. |
| UniGene | Rn.86960 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | A1EA77. |
Genome annotation databases | |
| Ensembl | ENSRNOT00000055596; ENSRNOP00000052460; ENSRNOG00000002981; Rattus norvegicus. [Genome view] ENSRNOT00000055597; ENSRNOP00000052461; ENSRNOG00000002981; Rattus norvegicus. [Genome view] |
Phylogenomic databases | |
| HOVERGEN | A1EA77. |
Gene expression databases | |
| Genevestigator | A1EA77. |
Family and domain databases | |
| InterPro | IPR005821. Ion_trans. IPR005445. VDCC_T_a1su. [Graphical view] |
| PANTHER | PTHR10037:SF44. TVDCCAlpha1. 1 hit. |
| Pfam | PF00520. Ion_trans. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | A1EA77_RAT | ||||||||
| Accession | Primary (citable) accession number: A1EA77 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||
