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A1E9Y8 (PSBA_AGRST) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Photosystem Q(B) protein
EC=1.10.3.9
Alternative name(s):
32 kDa thylakoid membrane protein
Photosystem II protein D1
Gene names
Name:psbA
Encoded onPlastid; Chloroplast
OrganismAgrostis stolonifera (Creeping bentgrass)
Taxonomic identifier63632 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Pooideae › Poeae › Agrostidinae › Agrostis

Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

This is one of the two reaction center proteins of photosystem II By similarity. HAMAP-Rule MF_01379

Catalytic activity

2 H2O + 2 plastoquinone + 4 light = O2 + 2 plastoquinol. HAMAP-Rule MF_01379

Cofactor

The psbA/B heterodimer binds P680, the primary electron donor of PSII. It shares a non-heme iron and each subunit binds additional chlorophylls and pheophytin. PsbA provides most of the ligands for the Mn-cluster of the oxygen-evolving complex By similarity.

Subunit structure

The psbA/B heterodimer binds the P680 chlorophylls and subsequent electron acceptors. PSII consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. PSII forms dimeric complexes By similarity.

Subcellular location

Plastid › chloroplast thylakoid membrane; Multi-pass membrane protein By similarity HAMAP-Rule MF_01379.

Miscellaneous

Herbicides such as atrazine, BNT, diuron or ioxynil bind to Q(B) and block electron transport By similarity. HAMAP-Rule MF_01379

Sequence similarities

Belongs to the reaction center PufL/M/PsbA/D family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 344344Photosystem Q(B) protein HAMAP-Rule MF_01379
PRO_0000339942
Propeptide345 – 3539 Potential
PRO_0000339943

Regions

Transmembrane36 – 5621Helical; Potential
Transmembrane109 – 12921Helical; Potential
Transmembrane141 – 16424Helical; Potential
Transmembrane192 – 21827Helical; Potential
Transmembrane269 – 28921Helical; Potential

Sites

Metal binding2151Iron; shared with heterodimeric partner By similarity
Metal binding2721Iron; shared with heterodimeric partner By similarity
Site344 – 3452Cleavage; by ctpA By similarity

Amino acid modifications

Modified residue21N-acetylthreonine By similarity
Modified residue21Phosphothreonine By similarity

Sequences

Sequence LengthMass (Da)Tools
A1E9Y8 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: AA6BFC3FBFCE1C79

FASTA35338,935
        10         20         30         40         50         60 
MTAILERRES TSLWGRFCNW ITSTENRLYI GWFGVLMIPT LLTATSVFII AFIAAPPVDI 

        70         80         90        100        110        120 
DGIREPVSGS LLYGNNIISG AIIPTSAAIG LHFYPIWEAA SVDEWLYNGG PYELIVLHFL 

       130        140        150        160        170        180 
LGVACYMGRE WELSFRLGMR PWIAVAYSAP VAAATAVFLI YPIGQGSFSD GMPLGISGTF 

       190        200        210        220        230        240 
NFMIVFQAEH NILMHPFHML GVAGVFGGSL FSAMHGSLVT SSLIRETTEN ESANEGYKFG 

       250        260        270        280        290        300 
QEEETYNIVA AHGYFGRLIF QYASFNNSRS LHFFLAAWPV VGIWFTALGI STMAFNLNGF 

       310        320        330        340        350 
NFNQSVVDSQ GRVINTWADI INRANLGMEV MHERNAHNFP LDLAALEVPS ING

« Hide

References

[1]"Complete chloroplast genome sequences of Hordeum vulgare, Sorghum bicolor and Agrostis stolonifera, and comparative analyses with other grass genomes."
Saski C., Lee S.-B., Fjellheim S., Guda C., Jansen R.K., Luo H., Tomkins J., Rognli O.A., Daniell H., Clarke J.L.
Theor. Appl. Genet. 115:571-590(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Penn A-4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		EF115543 Genomic DNA. Translation: ABK79560.1.
RefSeqYP_874716.1. NC_008591.1.

3D structure databases

ProteinModelPortalA1E9Y8.
SMRA1E9Y8. Positions 10-344.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4524968.

Organism-specific databases

GrameneA1E9Y8.

Phylogenomic databases

ProtClustDBCHL00003.

Family and domain databases

Gene3D1.20.85.10. 1 hit.
HAMAPMF_01379. PSII_PsbA_D1.
InterProIPR000484. Photo_RC_L/M.
IPR005867. PSII_D1.
[Graphical view]
PfamPF00124. Photo_RC. 1 hit.
[Graphical view]
PRINTSPR00256. REACTNCENTRE.
SUPFAMSSF81483. Photo_RC_L/M. 1 hit.
TIGRFAMsTIGR01151. psbA. 1 hit.
PROSITEPS00244. REACTION_CENTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry namePSBA_AGRST
AccessionPrimary (citable) accession number: A1E9Y8
Entry history
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: January 23, 2007
Last modified: April 3, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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