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A1DHW8 (ABNB_NEOFI) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable arabinan endo-1,5-alpha-L-arabinosidase B

EC=3.2.1.99
Alternative name(s):
Endo-1,5-alpha-L-arabinanase B
Short name=ABN B
Gene names
Name:abnB
ORF Names:NFIA_089320
OrganismNeosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (Aspergillus fischerianus) [Complete proteome]
Taxonomic identifier331117 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeNeosartorya

Protein attributes

Sequence length372 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Endo-1,5-alpha-L-arabinanase involved in degradation of pectin. Its preferred substrate is linear 1,5-alpha-L-arabinan By similarity.

Catalytic activity

Endohydrolysis of (1->5)-alpha-arabinofuranosidic linkages in (1->5)-arabinans.

Pathway

Glycan metabolism; L-arabinan degradation.

Subcellular location

Secreted By similarity.

Sequence similarities

Belongs to the glycosyl hydrolase 43 family.

Sequence caution

The sequence EAW18975.1 differs from that shown. Reason: Frameshift at positions 353 and 357.

Ontologies

Keywords
   Biological processCarbohydrate metabolism
Polysaccharide degradation
Xylan degradation
   Cellular componentSecreted
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMGlycoprotein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processarabinan catabolic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

xylan catabolic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionarabinan endo-1,5-alpha-L-arabinosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1616 Potential
Chain17 – 372356Probable arabinan endo-1,5-alpha-L-arabinosidase B
PRO_0000394631

Amino acid modifications

Glycosylation3631N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
A1DHW8 [UniParc].

Last modified June 15, 2010. Version 2.
Checksum: B1E2FB8A6B1D2C54

FASTA37241,116
        10         20         30         40         50         60 
MAVLVALFCL VTWALCTRIP QYSTQGTQQL QQPEKTPHPH PRPEDPFPPT HAADFKIHDP 

        70         80         90        100        110        120 
SIIHVDGTYY SYSVGKHIRI HQAPSLDGPW KRTGTVLDAD SVIPKGDRKA PWAPQTVHHG 

       130        140        150        160        170        180 
DTYYCFYAVS NSGCRDSAIG VATSKSPGPG GWTDHGLLVQ SGTGKGSDEH PFASSNTIDP 

       190        200        210        220        230        240 
SVFVGEDGHG YLMFGSFWSG IWQVPLDETL LSVAGDTRSE ARQLVYMEKA PLPASKHPNP 

       250        260        270        280        290        300 
LCREPSGARP IEGSFLSYHE PWYYLWFSYG KCCKFDTKNL PPPGREYSIR VGRSKSPRGP 

       310        320        330        340        350        360 
FVDKQGRDLA NGGGEIVYAS NRDVYAPGGQ AVLTEKSGDI LYYHYCRYPA VQETEVDADL 

       370 
TVNKSTSYDF WV 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DS027696 Genomic DNA. Translation: EAW18975.1. Frameshift.
RefSeqXP_001260872.1. XM_001260871.1.

3D structure databases

ProteinModelPortalA1DHW8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4587430.
KEGGnfi:NFIA_089320.

Phylogenomic databases

eggNOGCOG3507.
KOK06113.
OrthoDBEOG761C4Q.

Enzyme and pathway databases

UniPathwayUPA00667.

Family and domain databases

Gene3D2.115.10.20. 1 hit.
InterProIPR006710. Glyco_hydro_43.
IPR016840. Glyco_hydro_43_endo_a_Ara-ase.
IPR023296. Glyco_hydro_beta-prop.
[Graphical view]
PANTHERPTHR22925. PTHR22925. 1 hit.
PfamPF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
PIRSFPIRSF026534. Endo_alpha-L-arabinosidase. 1 hit.
SUPFAMSSF75005. SSF75005. 1 hit.
ProtoNetSearch...

Entry information

Entry nameABNB_NEOFI
AccessionPrimary (citable) accession number: A1DHW8
Entry history
Integrated into UniProtKB/Swiss-Prot: June 15, 2010
Last sequence update: June 15, 2010
Last modified: February 19, 2014
This is version 38 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries