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Protein

Probable E3 ubiquitin ligase complex SCF subunit sconB

Gene

sconB

Organism
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) (Aspergillus fischerianus)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Component of the SCF(sconB) E3 ubiquitin ligase complex involved in the regulation of sulfur metabolite repression, probably by mediating the inactivation or degradation of the metR transcription factor.By similarity

Pathwayi: protein ubiquitination

This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.
View all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulation, Ubl conjugation pathway

Enzyme and pathway databases

UniPathwayiUPA00143

Names & Taxonomyi

Protein namesi
Recommended name:
Probable E3 ubiquitin ligase complex SCF subunit sconB
Alternative name(s):
Sulfur controller B
Sulfur metabolite repression control protein B
Gene namesi
Name:sconB
ORF Names:NFIA_089300
OrganismiNeosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) (Aspergillus fischerianus)
Taxonomic identifieri331117 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillus
Proteomesi
  • UP000006702 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiFungiDB:NFIA_089300

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003972531 – 689Probable E3 ubiquitin ligase complex SCF subunit sconBAdd BLAST689

Interactioni

Subunit structurei

Component of the SCF(sconB) E3 ubiquitin ligase complex.By similarity

GO - Molecular functioni

Protein-protein interaction databases

STRINGi36630.CADNFIAP00006688

Structurei

3D structure databases

ProteinModelPortaliA1DHW6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini186 – 232F-boxPROSITE-ProRule annotationAdd BLAST47
Repeati358 – 395WD 1Add BLAST38
Repeati398 – 437WD 2Add BLAST40
Repeati439 – 475WD 3Add BLAST37
Repeati477 – 518WD 4Add BLAST42
Repeati572 – 615WD 5Add BLAST44
Repeati616 – 655WD 6Add BLAST40
Repeati658 – 689WD 7Add BLAST32

Sequence similaritiesi

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

HOGENOMiHOG000166480
KOiK10259
OMAiTQCCFPQ
OrthoDBiEOG092C10HM

Family and domain databases

Gene3Di2.130.10.10, 2 hits
InterProiView protein in InterPro
IPR036047 F-box-like_dom_sf
IPR001810 F-box_dom
IPR020472 G-protein_beta_WD-40_rep
IPR011047 Quinoprotein_ADH-like_supfam
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
PfamiView protein in Pfam
PF12937 F-box-like, 1 hit
PF00400 WD40, 6 hits
PRINTSiPR00320 GPROTEINBRPT
SMARTiView protein in SMART
SM00256 FBOX, 1 hit
SM00320 WD40, 7 hits
SUPFAMiSSF50998 SSF50998, 2 hits
SSF81383 SSF81383, 2 hits
PROSITEiView protein in PROSITE
PS50181 FBOX, 1 hit
PS00678 WD_REPEATS_1, 4 hits
PS50082 WD_REPEATS_2, 7 hits
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

A1DHW6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDAHELSFRD GHGSSTSTMK DECASEEKAL YLPGDSSFAS VFGPSETVED
60 70 80 90 100
VETGPESTQD KPHSFNTQKP IREKLAGKNV APFLARHIPE QYAPLGSQTG
110 120 130 140 150
QPVEISSANS KYCYRHRPDL KCRRQADEPT MDKLQRSDQQ GIAHAWSIFS
160 170 180 190 200
AAPAKHRKLI LQGIMAQCCF PQLSFISATV RDLIRIDFLT ALPPEISFKI
210 220 230 240 250
LCYLDTTSLC KAAQVSRRWR ALADDDVVWH RMCEQHIHRK CKKCGWGLPL
260 270 280 290 300
LDRKRLRESK REIERRAATW DVSEQPAETE SNSATIDTAA SGSKRKPESD
310 320 330 340 350
KEDTAMVKRQ CTSIVSQSEQ NEDYFKTRYR PWKEVYKDRF KVGTNWKYGR
360 370 380 390 400
CSIRVFKGHS NGIMCLQFED NILATGSYDA TIKIWDTETG EELRTLKGHR
410 420 430 440 450
SGIRCLQFDD TKLISGSMDH TLKVWNWRTG ECISTYSGHR GGVVGLHFDA
460 470 480 490 500
TILASGSVDK TVKIWNFEDK STCLLRGHTD WVNAVRVDSA SRTVFSASDD
510 520 530 540 550
CTVKLWDLDT KSCIRTFHGH VGQVQQVVPL PREFEFEDHD VECENDNVSV
560 570 580 590 600
TSGDSPAASP QAIPGFDAQT SDTPSSAFGP AFDDGRPSPP RYIVTSALDS
610 620 630 640 650
TIRLWETSSG RCLRTFFGHL EGVWALAADT LRIVSGAEDR MVKIWDPRTG
660 670 680
KCERTFTGHS GPVTCIGLGD SRFATGSEDC EVRMYSFQT
Length:689
Mass (Da):77,242
Last modified:January 23, 2007 - v1
Checksum:iB87ACA25A35F4994
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS027696 Genomic DNA Translation: EAW18973.1
RefSeqiXP_001260870.1, XM_001260869.1

Genome annotation databases

EnsemblFungiiCADNFIAT00006855; CADNFIAP00006688; CADNFIAG00006855
GeneIDi4587428
KEGGinfi:NFIA_089300

Similar proteinsi

Entry informationi

Entry nameiSCONB_NEOFI
AccessioniPrimary (citable) accession number: A1DHW6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 10, 2010
Last sequence update: January 23, 2007
Last modified: May 23, 2018
This is version 77 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

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