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A1CX14 (XYNC_NEOFI) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable endo-1,4-beta-xylanase C

Short name=Xylanase C
EC=3.2.1.8
Alternative name(s):
1,4-beta-D-xylan xylanohydrolase C
Gene names
Name:xlnC
ORF Names:NFIA_106540
OrganismNeosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (Aspergillus fischerianus) [Complete proteome]
Taxonomic identifier331117 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeNeosartorya

Protein attributes

Sequence length314 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Endo-1,4-beta-xylanase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose By similarity.

Catalytic activity

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.

Pathway

Glycan degradation; xylan degradation.

Subcellular location

Secreted By similarity.

Induction

Expressed in presence of xylan and repressed by glucose.

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family.

Ontologies

Keywords
   Biological processCarbohydrate metabolism
Polysaccharide degradation
Xylan degradation
   Cellular componentSecreted
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMDisulfide bond
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processxylan catabolic process

Inferred from sequence or structural similarity. Source: UniProtKB

   Cellular_componentextracellular region

Inferred from sequence or structural similarity. Source: UniProtKB

   Molecular_functionendo-1,4-beta-xylanase activity

Inferred from sequence or structural similarity. Source: UniProtKB

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1919 Potential
Chain20 – 314295Probable endo-1,4-beta-xylanase C
PRO_0000393195

Sites

Active site1541Proton donor By similarity
Active site2501Nucleophile By similarity

Amino acid modifications

Disulfide bond268 ↔ 274 By similarity

Sequences

Sequence LengthMass (Da)Tools
A1CX14 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: 1CA184D0E5D274F7

FASTA31434,254
        10         20         30         40         50         60 
MVVLSKLISS ILFASLVSAA VIERQATSIN QAFTSHGKKY FGTASDQRLL QNSQNEAIVR 

        70         80         90        100        110        120 
KDFGQLTPEN SMKWDATEPS RGSFNFAGAD FLVNYAKQNG MKVRGHTLVW HSQLPSWVSA 

       130        140        150        160        170        180 
ITDKNTLTSV LKNHITTVMT RYKGQIYHWD VVNEIFNEDG SLRDSVFSRV LGEDFVRIAF 

       190        200        210        220        230        240 
ETARSVDPSA KLYINDYNLD SASYGKTQGM VSHVKKWLAA GIPIDGIGSQ THLALTALAS 

       250        260        270        280        290        300 
SGVSEVAITE LDIAGASSQD YVNVVNACLG VPKCVGITVW GVSDKDSWRS SSSPLLFDSN 

       310 
YQPKAAYNAI IAAL 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DS027685 Genomic DNA. Translation: EAW25166.1.
RefSeqXP_001267063.1. XM_001267062.1.

3D structure databases

ProteinModelPortalA1CX14.
SMRA1CX14. Positions 26-314.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING36630.CADNFIAP00009419.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiCADNFIAT00009659; CADNFIAP00009419; CADNFIAG00009659.
GeneID4593532.
KEGGnfi:NFIA_106540.

Phylogenomic databases

eggNOGCOG3693.
HOGENOMHOG000019847.
KOK01181.
OMAYVNVVNA.
OrthoDBEOG7GJ6PM.

Enzyme and pathway databases

UniPathwayUPA00114.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001000. Glyco_hydro_10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSPR00134. GLHYDRLASE10.
SMARTSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameXYNC_NEOFI
AccessionPrimary (citable) accession number: A1CX14
Entry history
Integrated into UniProtKB/Swiss-Prot: March 23, 2010
Last sequence update: January 23, 2007
Last modified: February 19, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries