Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Probable alpha-L-arabinofuranosidase C

Gene

abfC

Organism
Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Alpha-L-arabinofuranosidase involved in the degradation of arabinoxylan, a major component of plant hemicellulose. Acts only on small linear 1,5-alpha-linked L-arabinofuranosyl oligosaccharides (By similarity).By similarity

Catalytic activityi

Hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.

Pathwayi

GO - Molecular functioni

  1. alpha-L-arabinofuranosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. arabinan catabolic process Source: UniProtKB-UniPathway
  2. L-arabinose metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation

Enzyme and pathway databases

UniPathwayiUPA00667.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable alpha-L-arabinofuranosidase C (EC:3.2.1.55)
Short name:
ABF C
Short name:
Arabinosidase C
Gene namesi
Name:abfC
ORF Names:ACLA_025610
OrganismiAspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
Taxonomic identifieri344612 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillus
ProteomesiUP000006701 Componenti: Unassembled WGS sequence

Subcellular locationi

Secreted By similarity

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini? – 505Probable alpha-L-arabinofuranosidase CPRO_0000394610
Signal peptidei1 – ?Sequence Analysis

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi152 – 1521N-linked (GlcNAc...)Sequence Analysis
Glycosylationi269 – 2691N-linked (GlcNAc...)Sequence Analysis
Glycosylationi438 – 4381N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Interactioni

Protein-protein interaction databases

STRINGi5057.CADACLAP00002990.

Structurei

3D structure databases

ProteinModelPortaliA1CQC3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 51 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG3534.
HOGENOMiHOG000236895.
KOiK01209.
OrthoDBiEOG71P2KW.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR010720. Alpha-L-AF_C.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF06964. Alpha-L-AF_C. 1 hit.
[Graphical view]
SMARTiSM00813. Alpha-L-AF_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A1CQC3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTFTKLSEQ ETPSIAVHAS RRISKINPNI YAGFTEHMGR CIYGGIYDPG
60 70 80 90 100
NPLSDENGFR KDVLEALKEL NIPVVRYPGG NFMATYHWID GVGPKDQRPS
110 120 130 140 150
RPELAWLGTE TNQFGTDEFM KWCELLGTEP YFCLNFGTGT LDEALAWVEY
160 170 180 190 200
CNGTRDTYYA NLRRKNGREE PYNIKYWALG NEVWGPWQVA QTTKEEYAHK
210 220 230 240 250
AYQWAKALKL LDPTLKLILC GQDGTASWDY YTLKHCILPV NSPLSTSAVP
260 270 280 290 300
LIDMHSIHLY TSSSSHLPNV TAPLAAERAI EITSSLIDLA MIENGVPNTQ
310 320 330 340 350
LRPTICFDEW NVWDPIRAEG SKGAEESYTL SDALAVAVWL NVFVRKSKDV
360 370 380 390 400
GMACIAQTVN VISPLMTTKD GIIKQTTWWP LYLFSKYMRG WTINTHVSCG
410 420 430 440 450
TYEGETAPSW VRTVKDTPWL DVSATLGEDG YVNVAVVNIS EDKDIESKFE
460 470 480 490 500
GAAGEVAVFT VNGDSVSACN MNGKQEVGVT ESTWDGKGAY AFPKHSLTLL

RWKAE
Length:505
Mass (Da):56,416
Last modified:June 15, 2010 - v2
Checksum:iB31B9769132A51C1
GO

Sequence cautioni

The sequence EAW07844.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS027059 Genomic DNA. Translation: EAW07844.1. Sequence problems.
RefSeqiXP_001269270.1. XM_001269269.1.

Genome annotation databases

GeneIDi4702002.
KEGGiact:ACLA_025610.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS027059 Genomic DNA. Translation: EAW07844.1. Sequence problems.
RefSeqiXP_001269270.1. XM_001269269.1.

3D structure databases

ProteinModelPortaliA1CQC3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi5057.CADACLAP00002990.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi4702002.
KEGGiact:ACLA_025610.

Phylogenomic databases

eggNOGiCOG3534.
HOGENOMiHOG000236895.
KOiK01209.
OrthoDBiEOG71P2KW.

Enzyme and pathway databases

UniPathwayiUPA00667.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR010720. Alpha-L-AF_C.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF06964. Alpha-L-AF_C. 1 hit.
[Graphical view]
SMARTiSM00813. Alpha-L-AF_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1.

Entry informationi

Entry nameiABFC_ASPCL
AccessioniPrimary (citable) accession number: A1CQC3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 15, 2010
Last sequence update: June 15, 2010
Last modified: January 7, 2015
This is version 46 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.