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Protein

Probable arabinan endo-1,5-alpha-L-arabinosidase A

Gene

abnA

Organism
Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Endo-1,5-alpha-L-arabinanase involved in degradation of pectin. Its preferred substrate is linear 1,5-alpha-L-arabinan (By similarity).By similarity

Catalytic activityi

Endohydrolysis of (1->5)-alpha-arabinofuranosidic linkages in (1->5)-arabinans.

Pathway:iL-arabinan degradation

This protein is involved in the pathway L-arabinan degradation, which is part of Glycan metabolism.
View all proteins of this organism that are known to be involved in the pathway L-arabinan degradation and in Glycan metabolism.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradation

Enzyme and pathway databases

UniPathwayiUPA00667.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable arabinan endo-1,5-alpha-L-arabinosidase A (EC:3.2.1.99)
Alternative name(s):
Endo-1,5-alpha-L-arabinanase A
Short name:
ABN A
Gene namesi
Name:abnA
ORF Names:ACLA_042100
OrganismiAspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
Taxonomic identifieri344612 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillus
ProteomesiUP000006701 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiFungiDB:ACLA_042100.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence AnalysisAdd
BLAST
Chaini20 – 321302Probable arabinan endo-1,5-alpha-L-arabinosidase APRO_0000394617Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliA1CLG4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 43 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG3507.
HOGENOMiHOG000292006.
KOiK06113.
OMAiTHEGLVV.
OrthoDBiEOG761C4Q.

Family and domain databases

Gene3Di2.115.10.20. 1 hit.
InterProiIPR006710. Glyco_hydro_43.
IPR016840. Glyco_hydro_43_endo_a_Ara-ase.
IPR023296. Glyco_hydro_beta-prop.
[Graphical view]
PANTHERiPTHR22925. PTHR22925. 1 hit.
PfamiPF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
PIRSFiPIRSF026534. Endo_alpha-L-arabinosidase. 1 hit.
SUPFAMiSSF75005. SSF75005. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A1CLG4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHPSTFVTTI ACLAGLAHGY ANPGSCSGAC NIHDPALIRR QSDGKYFRFS
60 70 80 90 100
TGNKISYASS SSIKGPWTVL GSVLPRGSSI NLPGKTDLWA PDISLVNGAY
110 120 130 140 150
HLYYSVSAFG SQDSAIGLAT SATMDPNSWT DHGSTGIRSS SSKPYNAIDA
160 170 180 190 200
NLFHDGGNYY MTFGSFWHDI YQAPMNSAAT AVSSGPYNIA YNPSGTHAVE
210 220 230 240 250
GAFMYKFGKY YYLFFSSGIC CGYDTSRPAA GKEYKIRVCR STSATGHFVD
260 270 280 290 300
KHGVSCTNGG GTVVLESHGH VYGPGGQGVF TDPALGPVLY YHYVDTRIGY
310 320
ADGQKRFGWN KIDFSSGWPV V
Length:321
Mass (Da):34,386
Last modified:January 23, 2007 - v1
Checksum:i0F6F4E185E20EBBB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS027056 Genomic DNA. Translation: EAW09988.1.
RefSeqiXP_001271414.1. XM_001271413.1.

Genome annotation databases

EnsemblFungiiCADACLAT00004069; CADACLAP00003989; CADACLAG00004069.
GeneIDi4702768.
KEGGiact:ACLA_042100.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS027056 Genomic DNA. Translation: EAW09988.1.
RefSeqiXP_001271414.1. XM_001271413.1.

3D structure databases

ProteinModelPortaliA1CLG4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiCADACLAT00004069; CADACLAP00003989; CADACLAG00004069.
GeneIDi4702768.
KEGGiact:ACLA_042100.

Organism-specific databases

EuPathDBiFungiDB:ACLA_042100.

Phylogenomic databases

eggNOGiCOG3507.
HOGENOMiHOG000292006.
KOiK06113.
OMAiTHEGLVV.
OrthoDBiEOG761C4Q.

Enzyme and pathway databases

UniPathwayiUPA00667.

Family and domain databases

Gene3Di2.115.10.20. 1 hit.
InterProiIPR006710. Glyco_hydro_43.
IPR016840. Glyco_hydro_43_endo_a_Ara-ase.
IPR023296. Glyco_hydro_beta-prop.
[Graphical view]
PANTHERiPTHR22925. PTHR22925. 1 hit.
PfamiPF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
PIRSFiPIRSF026534. Endo_alpha-L-arabinosidase. 1 hit.
SUPFAMiSSF75005. SSF75005. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1.

Entry informationi

Entry nameiABNA_ASPCL
AccessioniPrimary (citable) accession number: A1CLG4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 15, 2010
Last sequence update: January 23, 2007
Last modified: July 22, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.