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A1CHQ0

- XYNC_ASPCL

UniProt

A1CHQ0 - XYNC_ASPCL

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Protein

Probable endo-1,4-beta-xylanase C

Gene

xlnC

Organism
Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Endo-1,4-beta-xylanase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose.By similarity

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei155 – 1551Proton donorBy similarity
Active sitei253 – 2531NucleophileBy similarity

GO - Molecular functioni

  1. endo-1,4-beta-xylanase activity Source: UniProtKB

GO - Biological processi

  1. xylan catabolic process Source: UniProtKB
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradation

Enzyme and pathway databases

UniPathwayiUPA00114.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable endo-1,4-beta-xylanase C (EC:3.2.1.8)
Short name:
Xylanase C
Alternative name(s):
1,4-beta-D-xylan xylanohydrolase C
Gene namesi
Name:xlnC
ORF Names:ACLA_048770
OrganismiAspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
Taxonomic identifieri344612 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillus
ProteomesiUP000006701: Unassembled WGS sequence

Subcellular locationi

Secreted By similarity

GO - Cellular componenti

  1. extracellular region Source: UniProtKB
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence AnalysisAdd
BLAST
Chaini22 – 317296Probable endo-1,4-beta-xylanase CPRO_0000393185Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi271 ↔ 277By similarity

Keywords - PTMi

Disulfide bond

Expressioni

Inductioni

Expressed in presence of xylan and repressed by glucose.

Interactioni

Protein-protein interaction databases

STRINGi5057.CADACLAP00004761.

Structurei

3D structure databases

ProteinModelPortaliA1CHQ0.
SMRiA1CHQ0. Positions 29-317.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG3693.
HOGENOMiHOG000019847.
KOiK01181.
OMAiNAKVQGM.
OrthoDBiEOG7GJ6PM.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001000. Glyco_hydro_10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A1CHQ0 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVVLSKIFSC ALFLSLGSAA AIDIRQTSSI NNAFKSHGKK YFGTCGDQNT
60 70 80 90 100
LSIPQNSAII KADFGALTPE NSMKWDATEP SRGKFNFAGA DHLVNYAKQN
110 120 130 140 150
GKLVRGHTLV WYSQLPAWVK AISDKQTLTS VLKNHITTVM SRYKGQVYAW
160 170 180 190 200
DVVNEIFEEN GSLRNSVFYR VLGEDFVRIA FETARAVDPH AKLYINDYNL
210 220 230 240 250
DSANYGKTQA MVKHVKKWLA AGIPIDGIGS QSHLSQALSA LASTGVSEIA
260 270 280 290 300
ITELDIKGAN PSEYVAVTKA CLEVKKCIGI TVWGVSDKNS WRKDNSPLLF
310
DRNYNPKPAY NAIIAAL
Length:317
Mass (Da):34,832
Last modified:January 23, 2007 - v1
Checksum:iE3C0C4CD44371CD8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS027054 Genomic DNA. Translation: EAW10405.1.
RefSeqiXP_001271831.1. XM_001271830.1.

Genome annotation databases

EnsemblFungiiCADACLAT00004862; CADACLAP00004761; CADACLAG00004862.
GeneIDi4704046.
KEGGiact:ACLA_048770.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS027054 Genomic DNA. Translation: EAW10405.1 .
RefSeqi XP_001271831.1. XM_001271830.1.

3D structure databases

ProteinModelPortali A1CHQ0.
SMRi A1CHQ0. Positions 29-317.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 5057.CADACLAP00004761.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii CADACLAT00004862 ; CADACLAP00004761 ; CADACLAG00004862 .
GeneIDi 4704046.
KEGGi act:ACLA_048770.

Phylogenomic databases

eggNOGi COG3693.
HOGENOMi HOG000019847.
KOi K01181.
OMAi NAKVQGM.
OrthoDBi EOG7GJ6PM.

Enzyme and pathway databases

UniPathwayi UPA00114 .

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001000. Glyco_hydro_10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF00331. Glyco_hydro_10. 1 hit.
[Graphical view ]
PRINTSi PR00134. GLHYDRLASE10.
SMARTi SM00633. Glyco_10. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1.

Entry informationi

Entry nameiXYNC_ASPCL
AccessioniPrimary (citable) accession number: A1CHQ0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 23, 2010
Last sequence update: January 23, 2007
Last modified: October 1, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3