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A1CHQ0

- XYNC_ASPCL

UniProt

A1CHQ0 - XYNC_ASPCL

Protein

Probable endo-1,4-beta-xylanase C

Gene

xlnC

Organism
Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (23 Jan 2007)
      Previous versions | rss
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    Functioni

    Endo-1,4-beta-xylanase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose.By similarity

    Catalytic activityi

    Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei155 – 1551Proton donorBy similarity
    Active sitei253 – 2531NucleophileBy similarity

    GO - Molecular functioni

    1. endo-1,4-beta-xylanase activity Source: UniProtKB

    GO - Biological processi

    1. xylan catabolic process Source: UniProtKB

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolism, Polysaccharide degradation, Xylan degradation

    Enzyme and pathway databases

    UniPathwayiUPA00114.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable endo-1,4-beta-xylanase C (EC:3.2.1.8)
    Short name:
    Xylanase C
    Alternative name(s):
    1,4-beta-D-xylan xylanohydrolase C
    Gene namesi
    Name:xlnC
    ORF Names:ACLA_048770
    OrganismiAspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
    Taxonomic identifieri344612 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillus
    ProteomesiUP000006701: Unassembled WGS sequence

    Subcellular locationi

    Secreted By similarity

    GO - Cellular componenti

    1. extracellular region Source: UniProtKB

    Keywords - Cellular componenti

    Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2121Sequence AnalysisAdd
    BLAST
    Chaini22 – 317296Probable endo-1,4-beta-xylanase CPRO_0000393185Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Disulfide bondi271 ↔ 277By similarity

    Keywords - PTMi

    Disulfide bond

    Expressioni

    Inductioni

    Expressed in presence of xylan and repressed by glucose.

    Interactioni

    Protein-protein interaction databases

    STRINGi5057.CADACLAP00004761.

    Structurei

    3D structure databases

    ProteinModelPortaliA1CHQ0.
    SMRiA1CHQ0. Positions 29-317.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG3693.
    HOGENOMiHOG000019847.
    KOiK01181.
    OMAiNAKVQGM.
    OrthoDBiEOG7GJ6PM.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001000. Glyco_hydro_10.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF00331. Glyco_hydro_10. 1 hit.
    [Graphical view]
    PRINTSiPR00134. GLHYDRLASE10.
    SMARTiSM00633. Glyco_10. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A1CHQ0-1 [UniParc]FASTAAdd to Basket

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    MVVLSKIFSC ALFLSLGSAA AIDIRQTSSI NNAFKSHGKK YFGTCGDQNT    50
    LSIPQNSAII KADFGALTPE NSMKWDATEP SRGKFNFAGA DHLVNYAKQN 100
    GKLVRGHTLV WYSQLPAWVK AISDKQTLTS VLKNHITTVM SRYKGQVYAW 150
    DVVNEIFEEN GSLRNSVFYR VLGEDFVRIA FETARAVDPH AKLYINDYNL 200
    DSANYGKTQA MVKHVKKWLA AGIPIDGIGS QSHLSQALSA LASTGVSEIA 250
    ITELDIKGAN PSEYVAVTKA CLEVKKCIGI TVWGVSDKNS WRKDNSPLLF 300
    DRNYNPKPAY NAIIAAL 317
    Length:317
    Mass (Da):34,832
    Last modified:January 23, 2007 - v1
    Checksum:iE3C0C4CD44371CD8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS027054 Genomic DNA. Translation: EAW10405.1.
    RefSeqiXP_001271831.1. XM_001271830.1.

    Genome annotation databases

    EnsemblFungiiCADACLAT00004862; CADACLAP00004761; CADACLAG00004862.
    GeneIDi4704046.
    KEGGiact:ACLA_048770.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS027054 Genomic DNA. Translation: EAW10405.1 .
    RefSeqi XP_001271831.1. XM_001271830.1.

    3D structure databases

    ProteinModelPortali A1CHQ0.
    SMRi A1CHQ0. Positions 29-317.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5057.CADACLAP00004761.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii CADACLAT00004862 ; CADACLAP00004761 ; CADACLAG00004862 .
    GeneIDi 4704046.
    KEGGi act:ACLA_048770.

    Phylogenomic databases

    eggNOGi COG3693.
    HOGENOMi HOG000019847.
    KOi K01181.
    OMAi NAKVQGM.
    OrthoDBi EOG7GJ6PM.

    Enzyme and pathway databases

    UniPathwayi UPA00114 .

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001000. Glyco_hydro_10.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF00331. Glyco_hydro_10. 1 hit.
    [Graphical view ]
    PRINTSi PR00134. GLHYDRLASE10.
    SMARTi SM00633. Glyco_10. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1.

    Entry informationi

    Entry nameiXYNC_ASPCL
    AccessioniPrimary (citable) accession number: A1CHQ0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 23, 2010
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3