A1CED1 (A1CED1_ASPCL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
DNA-directed RNA polymerase subunit PIRNR PIRNR005586
EC=2.7.7.6 PIRNR PIRNR005586

Gene names

ORF Names:

ACLA_089220 EMBL EAW11230.1

Organism

Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) [Complete proteome]

Taxonomic identifier

344612 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Pezizomycotina › leotiomyceta › Eurotiomycetes › Eurotiomycetidae › Eurotiales › Trichocomaceae › mitosporic Trichocomaceae › Aspergillus › Aspergillus clavatus

Protein attributes

Sequence length	147 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates By similarity. PIRNR PIRNR005586
Catalytic activity	Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). PIRNR PIRNR005586
Subunit structure	Component of the RNA polymerase By similarity. PIRNR PIRNR005586
Subcellular location	Nucleus By similarity PIRNR PIRNR005586.
Sequence similarities	Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. PIRNR PIRNR005586

Ontologies

Keywords
Biological process	Transcription
Cellular component	DNA-directed RNA polymerase PIRNR PIRNR005586 EMBL EAW11230.1 Nucleus PIRNR PIRNR005586
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW nucleic acid binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1CED1 [UniParc]. Last modified January 23, 2007. Version 1. Checksum: 1DB533F7F20D581B	FASTA	147	15,851
	10 20 30 40 50 60 MSAIGSLIFC TDCGNLLPES TGDPTKVLLC DVCGARNKDT VPNTIVSESK PNAFPSALRA 70 80 90 100 110 120 KRSAVQTLTA EDKRTEALTQ HTCARCGRKE MYFTTVQLRS ADEGSTVFYT CVCGYKYANP 130 140 VAHLFVALNA DNYSQGNCKQ LGARGRG

References

[1]

"Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus." Fedorova N.D., Khaldi N., Joardar V.S., Maiti R., Amedeo P., Anderson M.J., Crabtree J., Silva J.C., Badger J.H., Albarraq A., Angiuoli S., Bussey H., Bowyer P., Cotty P.J., Dyer P.S., Egan A., Galens K., Fraser-Liggett C.M. , Haas B.J., Inman J.M., Kent R., Lemieux S., Malavazi I., Orvis J., Roemer T., Ronning C.M., Sundaram J.P., Sutton G., Turner G., Venter J.C., White O.R., Whitty B.R., Youngman P., Wolfe K.H., Goldman G.H., Wortman J.R., Jiang B., Denning D.W., Nierman W.C. PLoS Genet. 4:E1000046-E1000046(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS027052 Genomic DNA. Translation: EAW11230.1.
RefSeq	XP_001272656.1. XM_001272655.1.
3D structure databases
ProteinModelPortal	A1CED1.
ModBase	Search...
Protein-protein interaction databases
STRING	5057.CADACLAP00008213.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblFungi	CADACLAT00008423; CADACLAP00008213; CADACLAG00008423.
GeneID	4705320.
KEGG	act:ACLA_089220.
Phylogenomic databases
HOGENOM	HOG000228133.
KO	K03000.
OrthoDB	EOG45QMPS.
Family and domain databases
InterPro	IPR019761. DNA-dir_RNA_pol-M_15_CS. IPR012164. DNA-dir_RNApol_C11. IPR001222. Znf_TFIIS. [Graphical view]
Pfam	PF01096. TFIIS_C. 1 hit. [Graphical view]
PIRSF	PIRSF005586. RNApol_RpoM. 1 hit.
SMART	SM00440. ZnF_C2C2. 1 hit. [Graphical view]
PROSITE	PS01030. RNA_POL_M_15KD. 1 hit. PS51133. ZF_TFIIS_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1CED1_ASPCL

Accession

Primary (citable) accession number: A1CED1

Entry history

Integrated into UniProtKB/TrEMBL:	January 23, 2007
Last sequence update:	January 23, 2007
Last modified:	April 3, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)