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A1C7P9

- XLNR_ASPCL

UniProt

A1C7P9 - XLNR_ASPCL

Protein

Xylanolytic transcriptional activator xlnR

Gene

xlnR

Organism
Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 2 (23 Mar 2010)
      Previous versions | rss
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    Functioni

    Transcriptional activator of the xylanolytic system. Involved in the regulation of extracellular cellulolytic and xylanolytic genes and in the regulation of the intracellular activities of D-xylose catabolic genes in the pentose catabolic pathway (PCP) in response to the presence of D-xylose By similarity.By similarity

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    DNA bindingi140 – 16627Zn(2)-C6 fungal-typePROSITE-ProRule annotationAdd
    BLAST

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. sequence-specific DNA binding RNA polymerase II transcription factor activity Source: InterPro
    3. zinc ion binding Source: InterPro

    GO - Biological processi

    1. positive regulation of transcription, DNA-templated Source: UniProtKB
    2. xylan catabolic process Source: UniProtKB

    Keywords - Molecular functioni

    Activator

    Keywords - Biological processi

    Transcription, Transcription regulation

    Keywords - Ligandi

    DNA-binding, Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylanolytic transcriptional activator xlnR
    Alternative name(s):
    Xylanase regulator
    Gene namesi
    Name:xlnR
    ORF Names:ACLA_074570
    OrganismiAspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
    Taxonomic identifieri344612 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillus
    ProteomesiUP000006701: Unassembled WGS sequence

    Subcellular locationi

    Nucleus PROSITE-ProRule annotation

    GO - Cellular componenti

    1. nucleus Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 978978Xylanolytic transcriptional activator xlnRPRO_0000393148Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi5057.CADACLAP00006304.

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi81 – 9515His-richAdd
    BLAST
    Compositional biasi184 – 1929Poly-Ala

    Sequence similaritiesi

    Belongs to the xlnR/xlr1 family.Curated
    Contains 1 Zn(2)-C6 fungal-type DNA-binding domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiNOG132941.
    HOGENOMiHOG000167193.
    OrthoDBiEOG7380DB.

    Family and domain databases

    Gene3Di4.10.240.10. 1 hit.
    InterProiIPR007219. Transcription_factor_dom_fun.
    IPR001138. Zn2-C6_fun-type_DNA-bd.
    [Graphical view]
    PfamiPF04082. Fungal_trans. 1 hit.
    PF00172. Zn_clus. 1 hit.
    [Graphical view]
    SMARTiSM00906. Fungal_trans. 1 hit.
    SM00066. GAL4. 1 hit.
    [Graphical view]
    SUPFAMiSSF57701. SSF57701. 1 hit.
    PROSITEiPS50048. ZN2_CY6_FUNGAL_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A1C7P9-1 [UniParc]FASTAAdd to Basket

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    MSTTSVQHFA PSYPPFSSGL SSNRMAQSQT PGLDTLAEGS QYALEQLQLS    50
    REAAAGDTTA TAASGPSDPM SKSKDPYDFD HHNHNHHNHH NNNHHPNSNS 100
    NNSLPGFKNP AQRDPLAEAR SAIRKNSSSA PVRRRISRAC DQCNQLRTRC 150
    DGQNPCAHCI EFGLTCEYAR ERKKRGKASK KDLAAAAAAA TATPGQPNEN 200
    PGKDSGTMVG GHSPPDRRQE LNGRYDPAFD AARNLSGSAQ PQLPHAEGPG 250
    MVGMPNTQHL PSPSQPPMGG GLEGLPMNGY NGLNDSNRPP IPVSELQSLH 300
    MLHSSNPHPR SPPSILPSQR YNGGYNENAY SLMNPQEHNP TPMNQFRLGN 350
    STENPPNTFL GLSPPAQSPG WLPLPSPSPA NFPSFSMASF STTLRYPVLH 400
    PVLPHIASII PQSLACDLLD VYFTSSSSSH LSPQSPYVVG YIFRKQSFLH 450
    PTKPRACSPG LLASMLWVAA QTSDAPFLTS PPSARGRVCQ KLLELTVGLL 500
    RPLIHGPAPG ETSPNYAANM VINGIALGGF GVSMDQLGAQ SSATGAVDDV 550
    ATYVHLATVI SASEYKAASM RWWTAAWSLA RELKLGRELP PNTSQTRQDG 600
    ERENDPDADP SNRHSPSLIT AMGHGPGNTV INVTEDEREE RRRLWWLLYA 650
    TDRHLALCYN RPLTLLDKEC NGLLQPMNDD LWQASDFASA SYRQAGPPLE 700
    CSGHSMFGYF LPLMTILGEI IDLQQARNHP RFGLAFRGSP ECDAQVLEIA 750
    RQLDLYAQTL KEFETRYTSG LALGAADNDT AMEGSHLNHV SPSGRSSSTV 800
    DSRVNESIVH TKMVVAYGTH IMHVLHILLA GKWDPINLLD DNDLWISSES 850
    FIAAMGHAVG AAEAAADILE YDPDLSFMPF FFGIYLLQGS FLLLLTADKL 900
    QGDASPSVVR ACETIVRAHE ACVVTLNTEY QRTFRKVMRS ALAQVRGRLP 950
    EDFGEQQQRR REVLALYRWT GDGSGLAL 978
    Length:978
    Mass (Da):106,488
    Last modified:March 23, 2010 - v2
    Checksum:i4EF80E9CCF68E95B
    GO

    Sequence cautioni

    The sequence EAW14420.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS027045 Genomic DNA. Translation: EAW14420.1. Different initiation.
    RefSeqiXP_001275846.1. XM_001275845.1.

    Genome annotation databases

    GeneIDi4707549.
    KEGGiact:ACLA_074570.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS027045 Genomic DNA. Translation: EAW14420.1 . Different initiation.
    RefSeqi XP_001275846.1. XM_001275845.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5057.CADACLAP00006304.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4707549.
    KEGGi act:ACLA_074570.

    Phylogenomic databases

    eggNOGi NOG132941.
    HOGENOMi HOG000167193.
    OrthoDBi EOG7380DB.

    Family and domain databases

    Gene3Di 4.10.240.10. 1 hit.
    InterProi IPR007219. Transcription_factor_dom_fun.
    IPR001138. Zn2-C6_fun-type_DNA-bd.
    [Graphical view ]
    Pfami PF04082. Fungal_trans. 1 hit.
    PF00172. Zn_clus. 1 hit.
    [Graphical view ]
    SMARTi SM00906. Fungal_trans. 1 hit.
    SM00066. GAL4. 1 hit.
    [Graphical view ]
    SUPFAMi SSF57701. SSF57701. 1 hit.
    PROSITEi PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1.

    Entry informationi

    Entry nameiXLNR_ASPCL
    AccessioniPrimary (citable) accession number: A1C7P9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 23, 2010
    Last sequence update: March 23, 2010
    Last modified: October 1, 2014
    This is version 44 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3