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Protein

Probable E3 ubiquitin ligase complex SCF subunit sconB

Gene

sconB

Organism
Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Component of the SCF(sconB) E3 ubiquitin ligase complex involved in the regulation of sulfur metabolite repression, probably by mediating the inactivation or degradation of the metR transcription factor.By similarity

Pathwayi: protein ubiquitination

This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.
View all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation, Ubl conjugation pathway

Enzyme and pathway databases

UniPathwayiUPA00143.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable E3 ubiquitin ligase complex SCF subunit sconB
Alternative name(s):
Sulfur controller B
Sulfur metabolite repression control protein B
Gene namesi
Name:sconB
ORF Names:ACLA_073500
OrganismiAspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
Taxonomic identifieri344612 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillus
Proteomesi
  • UP000006701 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiFungiDB:ACLA_073500.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003972451 – 700Probable E3 ubiquitin ligase complex SCF subunit sconBAdd BLAST700

Interactioni

Subunit structurei

Component of the SCF(sconB) E3 ubiquitin ligase complex.By similarity

Structurei

3D structure databases

ProteinModelPortaliA1C7E4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini195 – 241F-boxPROSITE-ProRule annotationAdd BLAST47
Repeati369 – 406WD 1Add BLAST38
Repeati409 – 448WD 2Add BLAST40
Repeati450 – 486WD 3Add BLAST37
Repeati488 – 529WD 4Add BLAST42
Repeati583 – 626WD 5Add BLAST44
Repeati627 – 666WD 6Add BLAST40
Repeati669 – 700WD 7Add BLAST32

Sequence similaritiesi

Contains 1 F-box domain.PROSITE-ProRule annotation
Contains 7 WD repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

HOGENOMiHOG000166480.
KOiK10259.
OMAiMCLQFSE.
OrthoDBiEOG092C10HM.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR001810. F-box_dom.
IPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF12937. F-box-like. 1 hit.
PF00400. WD40. 6 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00256. FBOX. 1 hit.
SM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 2 hits.
SSF81383. SSF81383. 2 hits.
PROSITEiPS50181. FBOX. 1 hit.
PS00678. WD_REPEATS_1. 4 hits.
PS50082. WD_REPEATS_2. 7 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1C7E4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTQRLSLRK ENGSAHSLLQ DQTGLKENTM NIPRDSSFNS IFGPSEVVDD
60 70 80 90 100
AGTDRDFKHE SHKFSITRAM PEKLAGKNIA PFLAKHIPEQ YAPLGSHAGE
110 120 130 140 150
PVESSGANSR YCYRHRPDLK CRRQADEPTM DKLQRIAKEL ETLPQRDQQG
160 170 180 190 200
IAHAWSIFSA APAKHRKLLL QGIMAQCCFP QLSFISASVR DLIRIDFLTA
210 220 230 240 250
LPPEISFKIL CYLDTTSLCK AAQVSRRWRA LADDDVVWHR MCEQHIHRKC
260 270 280 290 300
KKCGWGLPLL DRKRLRESKR QIELRAATWD ISEQSTEDET GSPAPESASS
310 320 330 340 350
NAKRKPESDD EDTALVKRHC TSIVPRLEKE KDGDYFITRY RPWKEVYKDR
360 370 380 390 400
FKVGTNWKYG RCSVKVFKGH TNGIMCLQFE DNILATGSYD ATIKIWDTET
410 420 430 440 450
GEELRTLRGH ESGIRCLQFD DTKLISGSMD RSLKVWNWRT GECISTYTGH
460 470 480 490 500
RGGVIGLHFD ATILASASVD KTVKIWNFED KSTCLLRGHT DWVNAVRVDT
510 520 530 540 550
NSRTVFSASD DCTIRLWDLD TKTCIRTFHG HVGQVQQVIP LPREFEFEDH
560 570 580 590 600
DAECENDNVS VTSGDSPAAS PRGIPGLDAG TSETQSSPFG PAFDNGRPAP
610 620 630 640 650
PRYIVTSALD STIRLWETST GRCLRTFFGH LEGVWALAAD TLRIVSGAED
660 670 680 690 700
RMVKIWDPRT GKCERTFTGH SGPVTCIGLG DSRFATGSED CEVRMYGFQS
Length:700
Mass (Da):78,780
Last modified:January 23, 2007 - v1
Checksum:i13AF6C49E352561B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS027045 Genomic DNA. Translation: EAW14315.1.
RefSeqiXP_001275741.1. XM_001275740.1.

Genome annotation databases

EnsemblFungiiCADACLAT00007182; CADACLAP00007022; CADACLAG00007182.
GeneIDi4707886.
KEGGiact:ACLA_073500.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS027045 Genomic DNA. Translation: EAW14315.1.
RefSeqiXP_001275741.1. XM_001275740.1.

3D structure databases

ProteinModelPortaliA1C7E4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiCADACLAT00007182; CADACLAP00007022; CADACLAG00007182.
GeneIDi4707886.
KEGGiact:ACLA_073500.

Organism-specific databases

EuPathDBiFungiDB:ACLA_073500.

Phylogenomic databases

HOGENOMiHOG000166480.
KOiK10259.
OMAiMCLQFSE.
OrthoDBiEOG092C10HM.

Enzyme and pathway databases

UniPathwayiUPA00143.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR001810. F-box_dom.
IPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF12937. F-box-like. 1 hit.
PF00400. WD40. 6 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00256. FBOX. 1 hit.
SM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 2 hits.
SSF81383. SSF81383. 2 hits.
PROSITEiPS50181. FBOX. 1 hit.
PS00678. WD_REPEATS_1. 4 hits.
PS50082. WD_REPEATS_2. 7 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSCONB_ASPCL
AccessioniPrimary (citable) accession number: A1C7E4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 10, 2010
Last sequence update: January 23, 2007
Last modified: November 2, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.