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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Chlorobium phaeobacteroides (strain DSM 266)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAminoacyl-tRNA synthetase, Ligase
Biological processProtein biosynthesis
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotation
Ordered Locus Names:Cpha266_2702
OrganismiChlorobium phaeobacteroides (strain DSM 266)
Taxonomic identifieri290317 [NCBI]
Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium
Proteomesi
  • UP000008701 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000180121 – 551Arginine--tRNA ligaseAdd BLAST551

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi290317.Cpha266_2702.

Structurei

3D structure databases

ProteinModelPortaliA1BJV9.
SMRiA1BJV9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi123 – 133"HIGH" regionAdd BLAST11

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107RUW. Bacteria.
COG0018. LUCA.
HOGENOMiHOG000247214.
KOiK01887.
OMAiNKPLHLG.
OrthoDBiPOG091H01RF.

Family and domain databases

CDDicd00671. ArgRS_core. 1 hit.
Gene3Di1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth. 1 hit.
InterProiView protein in InterPro
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR035684. ArgRS_core.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_Ia_anticodon-bd.
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiView protein in Pfam
PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
PRINTSiPR01038. TRNASYNTHARG.
SMARTiView protein in SMART
SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.

Sequencei

Sequence statusi: Complete.

A1BJV9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHDFFLPVIK NALLSLAVSS DKPVLIERPA DKKFGDFSTN IAFLIAKESR
60 70 80 90 100
RNPKEFAGEL IAHLSFPPDT IKSMTVAGPG FINFFLTPTF IMQSVEQILL
110 120 130 140 150
EGKGYGRSCL GKGKKAIVEY VSANPTGPLT IGRGRGGVLG DCIANLLETQ
160 170 180 190 200
SYAVTREYYF NDAGRQMQIL GESVRFRYLE LCGVAETFPE THYQGAYIRE
210 220 230 240 250
IAESLFAGHG AALQGVHDLL PFIKSAETII FKSIKNTLER IGIRHDSFFN
260 270 280 290 300
EHTLYHREGS GQSANEEVID LLREKQFIGE YDGATWFLTS RIGQEKDKVL
310 320 330 340 350
IKSSGEPSYR LPDIAYHITK FKRGYDLMVN VFGADHIDEY PDVLEALKIL
360 370 380 390 400
GYDASRIQVA INQFVTTTVD GQSVKMSTRK GNADLLDDLV DDVGPDATRL
410 420 430 440 450
FFIMRSKDSH LNFDIDLAKK QSKDNPVFYL HYAHARICSL LRMAALENGF
460 470 480 490 500
DPDGSGHHLL QLLDSEPELR LGLLLLEYPQ MITASIRLLE PQKMVDYLHS
510 520 530 540 550
VAELYHKFYQ ECPILKAEPD ISKARLFLSL ATKQVLCNGF RILGISAPES

M
Length:551
Mass (Da):61,751
Last modified:January 23, 2007 - v1
Checksum:iE072657A4C0039CC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000492 Genomic DNA. Translation: ABL66686.1.
RefSeqiWP_015961213.1. NC_008639.1.

Genome annotation databases

EnsemblBacteriaiABL66686; ABL66686; Cpha266_2702.
KEGGicph:Cpha266_2702.

Similar proteinsi

Entry informationi

Entry nameiSYR_CHLPD
AccessioniPrimary (citable) accession number: A1BJV9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 23, 2007
Last modified: August 30, 2017
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families